Query= MSMg01no475_h18.b1 MSMg01no475_h18.b1 CHROMAT_FILE:
MSMg01no475_h18.b1 PHD_FILE: MSMg01no475_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:16 2005
(471 letters)
>mm_chr5_77999331_78000201
Length = 871
Score = 911 bits (471), Expect = 0.0
Identities = 471/471 (100%)
Strand = Plus / Minus
Query: 1 ggcacagctagaaatccctcctgctcttagccattgttctctgtcactcctcaccctggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ggcacagctagaaatccctcctgctcttagccattgttctctgtcactcctcaccctggg 612
Query: 61 ccattcccagtcaggtgcaagaatgatgttctatgggcttgggggtgacgatataggaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ccattcccagtcaggtgcaagaatgatgttctatgggcttgggggtgacgatataggaac 552
Query: 121 aatgaccccctgaaaactccacatctctttgtttttacatcaccccgacaaatggtcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aatgaccccctgaaaactccacatctctttgtttttacatcaccccgacaaatggtcaag 492
Query: 181 gccaaagtattacttcccggagcagcatctgaacaagtgtcggcatcaggataaatctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gccaaagtattacttcccggagcagcatctgaacaagtgtcggcatcaggataaatctag 432
Query: 241 actgagtgcgttgctacgttgtgacacatttcaggccataatggaggcttaagtaggtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 actgagtgcgttgctacgttgtgacacatttcaggccataatggaggcttaagtaggtca 372
Query: 301 cttgggggcagcagtggtttgagccctgcctgctgcctctggccttatctgaaatgaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cttgggggcagcagtggtttgagccctgcctgctgcctctggccttatctgaaatgaagc 312
Query: 361 agccggttcttggtgtaatgtaattctcagaggtcctttggaggcagcttcaagcttggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 agccggttcttggtgtaatgtaattctcagaggtcctttggaggcagcttcaagcttggc 252
Query: 421 tggagctaacacaattcgttagagaaggagggagtcctccagagctgagtg 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tggagctaacacaattcgttagagaaggagggagtcctccagagctgagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_h18.g1 MSMg01no475_h18.g1 CHROMAT_FILE:
MSMg01no475_h18.g1 PHD_FILE: MSMg01no475_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:16 2005
(411 letters)
>mm_chr5_77812535_77813345
Length = 811
Score = 650 bits (336), Expect = 0.0
Identities = 375/392 (95%), Gaps = 7/392 (1%)
Strand = Plus / Plus
Query: 3 tacagaagcttcacgtcttgaagatgcgtgacggaagatgagacgctaaggggaacaaat 62
||||||||||||| | |||| || ||||||||||||| ||||||||||||||||
Sbjct: 210 tacagaagcttcatgccttg-------gtaacggaagatgagatgctaaggggaacaaat 262
Query: 63 gcctcgttccaaggcaagccagcaccggtctgtaatcccagctctcagataaaggcagga 122
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 263 gccttgttccaaggcaagccagcaccggtctgtaatcccagctcttagataaaggcagga 322
Query: 123 gggtcagcagctcagattatccttggctacataaaggagttcaaagccagcctgggattt 182
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 323 gggtcagcagctcagattatccttggctacataaaagagttcaaagccagcctgggattt 382
Query: 183 atgggattctgtcttaacagtaagaacaacaagggcaacaataattaaaattaggtaaca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atgggattctgtcttaacagtaagaacaacaagggcaacaataattaaaattaggtaaca 442
Query: 243 ggctcttggaacccaggcttctaaccactatgttgtaacacttcctaaatagtcaaaagc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggctcttggaacccaggcttctaaccactatgttgtaacacttcctaaatagtcaaaagc 502
Query: 303 tctgcctctgcactaaccaacatgcaaacagactttggggtcgacagaaaccgtgacaaa 362
||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||
Sbjct: 503 tctgcctctgcactaaccaacatgcaaacagactttgaggtccacagaaaccatgacaaa 562
Query: 363 agatccatttcctgcccccagtcttcaagaca 394
||||||||||||||||||||||||||||||||
Sbjct: 563 agatccatttcctgcccccagtcttcaagaca 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
