Query= MSMg01no476_j15.b1 MSMg01no476_j15.b1 CHROMAT_FILE:
MSMg01no476_j15.b1 PHD_FILE: MSMg01no476_j15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:45 2005
(244 letters)
>mm_chr5_126836129_126836771
Length = 643
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%), Gaps = 1/243 (0%)
Strand = Plus / Minus
Query: 1 ggctatcctgctgggacacagtaattactttctaaatccaggtgttctgtttgttggcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggctatcctgctgggacacagtaattactttctaaatccaggtgttctgtttgttggcaa 383
Query: 61 acagaatttatggatgatatgtttgcaaaataacccagcacttacaaagttagcttgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acagaatttatggatgatatgtttgcaaaataacccagcacttacaaagttagcttgcaa 323
Query: 121 attctacgtggttttacaagagctggttgttttgatttgataaaaaataccatgaaccct 180
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 322 attctacgtggttttacaagagctagttgttttgatttgataaaaa-taccatgaaccct 264
Query: 181 cattagcgtatagcaggtcaccggttaaattcagtgaaaacacaatgaaggatcatctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cattagcgtatagcaggtcaccggttaaattcagtgaaaacacaatgaaggatcatctta 204
Query: 241 ata 243
|||
Sbjct: 203 ata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_j15.g1 MSMg01no476_j15.g1 CHROMAT_FILE:
MSMg01no476_j15.g1 PHD_FILE: MSMg01no476_j15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:45 2005
(166 letters)
>mm_chr5_126675641_126676206
Length = 566
Score = 298 bits (154), Expect = 1e-85
Identities = 163/166 (98%)
Strand = Plus / Plus
Query: 1 tcctatccagcatgtgctctctccagcttcagtgtgctgctactaactatggtggtttta 60
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tcctattcagcatgtgctctctccagcttcagtgtgctgctactagctatggtggtttta 260
Query: 61 gacccaattacttccctcacaaaacgtcctgtgaccttggatcacatttgaaatgctgag 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 gacccaattacttccctcacaaaacgtcctgtaaccttggatcacatttgaaatgctgag 320
Query: 121 gatatgtcttgcatccatatgtgtcactgtatggctctatacaaag 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatatgtcttgcatccatatgtgtcactgtatggctctatacaaag 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
