ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCAACCGATTAACACTGAATGGCTGAGAAGCACCTGAAAAAAATGTCCA
ACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCA
CCTCACACCAGTCAGAATGGCTAAGATCAAAAACTGAGGTGACAGCAGAT
GCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCACTGCTGGTGGGAT
TGCAAGCTTATACAACAACTCTAGAAGTCAGTCTGGAAGTTCCTCAGAAA
ATTGGACATAATACTACCAGAAGATCCAGCAATACCTCTCCTGGGCATAT
ACCCAGAAGAAGTTCCAACTGGTAATAAGAACACATGCTCCACTATGTTC
ATAGCAGCCTTATTTATAATATCCAGAAGCTGGAAAGAACCCAGATGTCC
CTCAACAGAAGAATGGATACAGAAAGTGTGGTACATTTATACAATGGAGT
ACTACTCAGCTATTAAAAATAATGGATTTATGAAATTCTTGGACAAGTGG
ATGTATCTGGAGGATATCATCCTTAGTGAGGTAACCCAATCACAAAAGAA
GTCATTAGATATGCACTCACTGATAAGTGGATATTAGCCCAGAAACATAG
AACACCCAAGATACAATTTGCAAAACAAAAGAAAATCAAGAAGAGGGAAG
ACCTTTTATGTAGATAATTCATGCCTCCTTAGAATAGAGAACAAATACCC
ATGAAAT

ATTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAGGACAGCCAGGGCTGCACAGAGAAA
CCCTGTCTGGGGGGGGGGGGGAGACAGCAACAACAAGAAAAAAGAATAAA
TAGAAATTCTTGCTGATCAAATGGAAAGTGTCAACAAATGAGCATGTCTG
AGCAGTTCTGAAGGAAACCAAGCTAGACAAATATCCTGTAGAGGCAAGTC
CACCCTCCCCAGCCCTGCCTAGAGGATAATCAACAGGGCTGTCAACATTT
ACATCTATGAAGAAGCTCCCTTTCACCTCACTTTTTTTTTTTTCCATATG
AAATGAGCTGTTGAGGGAATGAGTTGGGAGGGCTGGTCAGGTGATTGGGC
ATCTCAAAATGAGGTGGCAAGGGAGATGAAGGACTGCACCTGTGAAGGGA
GCAAATGAAAGCATAATCCTTAACTCAGTCTCCTGTGACTAAGCCCCTCC
AGGAAGTCTAAGGTTCCTTAGGGCCTGCATTAGCTTGCCATCCTCTCCCT
TTCCGAAAGACTAAGGGAAAGTGGGACCACATGCTGGGTGATTGTTGCCT
ATTTTGTTCCTGGGAATTAGAAAACCCTTTCCCTGGAGTTTTCTGCAGTA
AGAGACCTCCTACATTACCCAGTAGAGCCTCTCTTGTGGGGCAGATTAAG
TGTCTCCATGATTCTTATTAGTCTCTCAATGACGCTGCTTTGATGTCTCC
AGAGTGAAGGAGCTCACTCTATCTATCTAN

Query= MSMg01no477_e20.g1 MSMg01no477_e20.g1 CHROMAT_FILE:
MSMg01no477_e20.g1 PHD_FILE: MSMg01no477_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:42 2005
         (615 letters)



>mm_chr5_20056951_20057964
          Length = 1014

 Score = 1029 bits (532), Expect = 0.0
 Identities = 592/622 (95%), Gaps = 20/622 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggacagccagggctgcacagagaaaccctgtctgggggggggggggaga---cagcaa 57
           |||||||||||||||||||||||||||||||||||         ||||| |   ||||||
Sbjct: 860 caggacagccagggctgcacagagaaaccctgtct--------cggggaaaaatcagcaa 809

                                                                       
Query: 58  caacaagaaaaaagaataaatagaaattcttgctgatcaaatggaaagtgtcaacaaatg 117
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 caacaagaaaaaagaataaatagaaattcttgctgatcaaatggaaagtgtcaacaaatg 749

                                                                       
Query: 118 agcatgtctgagcagttctgaaggaaaccaagctagacaaatatcctgtagaggcaagtc 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 748 agcatgtctgagcagttctgaaggaaaccaagctagacaaatatcctgtagaggccagtc 689

                                                                       
Query: 178 caccctccccagccctgcctagaggataatcaacagggctgtcaacatttacatctatga 237
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 caccttccccagccctgcctagaggataatcaacagggctgtcaacatttacatctatga 629

                                                                       
Query: 238 agaagctcc----ctttcacctcacttttttttttttccatatgaaatgagctgttgagg 293
           |||||||||        |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 628 agaagctccgggg----cacctcactttttttttttt-catatgaaatgagctgttgagg 574

                                                                       
Query: 294 gaatgagttgggagggctggtcaggtgattgggcatctcaaaatgaggtggcaagggaga 353
           |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 573 gaatgagttgggggggctggtcaggtgattgggcatctcagaatgaggtggcaagggaga 514

                                                                       
Query: 354 tgaaggactgcacctgtgaagggagcaaatgaaagcataatccttaactcagtctcctgt 413
           | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 taaaggactgcagctgtgaagggagcaaatgaaagcataatccttaactcagtctcctgt 454

                                                                       
Query: 414 gactaagcccctccaggaagtctaaggttccttagggcctgcattagcttgccatcctct 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gactaagcccctccaggaagtctaaggttccttagggcctgcattagcttgccatcctct 394

                                                                       
Query: 474 ccctttccgaaagactaagggaaagtgggaccacatgctgggtgattgttgcctattttg 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ccctttccgaaagactaagggaaagtgggaccacatgctgggtgattgttgcctattttg 334

                                                                       
Query: 534 ttcctgggaattagaaaaccctttccctggagttttctgcagtaagagacctcctacatt 593
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 333 ttcctgggaattagaaaaccctttccttggagttttctgcagtaagagacctcctacatt 274

                                 
Query: 594 acccagtagagcctctcttgtg 615
           |||||||||| |||||||||||
Sbjct: 273 acccagtagaacctctcttgtg 252


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1014
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1004
Effective search space:   607420
Effective search space used:   607420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)