Query= MSMg01no478_e20.b1 MSMg01no478_e20.b1 CHROMAT_FILE:
MSMg01no478_e20.b1 PHD_FILE: MSMg01no478_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:00 2005
(384 letters)
>mm_chr5_101804513_101805296
Length = 784
Score = 704 bits (364), Expect = 0.0
Identities = 379/384 (98%)
Strand = Plus / Plus
Query: 1 tactaacctccacatacatgatacacgtgagcatctgtatatatttgtatacacacatat 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tactaacctccatatacatgatacacgtgagcatctgtatatatttgtatacacacatat 260
Query: 61 caatacacatgcaaacacaagtgcatgcacacacatacaaacacatacacatagacacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatacacatgcaaacacaagtgcatgcacacacatacaaacacatacacatagacacat 320
Query: 121 acaaacacatacgtgtaagcgcacacagagacacatacaagctaactgcttagtgaggca 180
|||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 acaaacacatacatgtaagtgcacacagagacacatacaagctaaccgcttagtgaggca 380
Query: 181 tgagcaagataagtctagttagcacaaaactactcttgactttttgggagcctatagtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagcaagataagtctagttagcacaaaactactcttgactttttgggagcctatagtct 440
Query: 241 acattgaagggaattagaggctaaaattttaaaaattaggctggattaaaaatgagcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acattgaagggaattagaggctaaaattttaaaaattaggctggattaaaaatgagcttc 500
Query: 301 ttggtggtaagaactataatgaagctaagctgataaaagaggagcttgcaggtttgaggg 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 ttggtggtaagaactataatgaagctaagctgataaaaggggagcttgcaggtttgaggg 560
Query: 361 gttcctgttctagtaaatttttag 384
||||||||||||||||||||||||
Sbjct: 561 gttcctgttctagtaaatttttag 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_e20.g1 MSMg01no478_e20.g1 CHROMAT_FILE:
MSMg01no478_e20.g1 PHD_FILE: MSMg01no478_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:00 2005
(571 letters)
>mm_chr5_101949931_101950901
Length = 971
Score = 820 bits (424), Expect = 0.0
Identities = 457/476 (96%), Gaps = 14/476 (2%)
Strand = Plus / Minus
Query: 96 tgaactgtgtgcatgtgtggggctagatatgagtgtggaaactcattgtgcatgtgtgga 155
||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 971 tgaactgtgtgtgtgtgtggggctaggtatgagtgtggaaactcattgtgcatgtgtgga 912
Query: 156 ctgtctgtgtgtgtgtttctgtatgtgtatggactgtgtgtgtgagtgtgtgctctgtgt 215
|||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 911 ctgtctctgtgtgtgtttctgtatgtgtatggac------------tgtgtgctctgtgt 864
Query: 216 gtgtttatgtgtgcaaatgtgtgtgtactccgtgtgtatgtactttgtatgtatgtgagt 275
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 863 gtgtttatgtgtgcaaatgtgtgtgtactccatgtgtatgtactttgtatgtatgtgagt 804
Query: 276 atatgtgtactctgtgtagactgtgtgtgtgtgagagagagaaagagtgtgtgtggactg 335
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 803 atatgtgtactctgtgtagactgtgtgtgtgt--gagagagaaagagtgtgtgtggactg 746
Query: 336 tgtgtgtgtgattgtatgtggactgtgggtggcctgctcaacattttggtggatgtttca 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgtgtgtgtgattgtatgtggactgtgggtggcctgctcaacattttggtggatgtttca 686
Query: 396 ttcccaccccttttactacgaccctggtcagaccacttttatgcctgtgacagcttcatg 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttcccaccccttttactacgaccctggtcagaccacttttatgcctgtgacagcttcatg 626
Query: 456 aagcacaaaacacggagcggtacatggcatgaaattggcaacaaagcccagcaaaaggag 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagcacaaaacacggagcggtacatggcatgaaattggcaacaaagcccagcaaaaggag 566
Query: 516 gaacaattctccggcaggatgtgctcacaatatggctgattggatctggaagcaga 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaacaattctccggcaggatgtgctcacaatatggctgattggatctggaagcaga 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
