Query= MSMg01no478_p22.b1 MSMg01no478_p22.b1 CHROMAT_FILE:
MSMg01no478_p22.b1 PHD_FILE: MSMg01no478_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:50 2005
(681 letters)
>mm_chr5_98965241_98966321
Length = 1081
Score = 683 bits (353), Expect = 0.0
Identities = 377/385 (97%)
Strand = Plus / Minus
Query: 297 aattataaacagttttatataaacaattaacctttctgaaaatcatgttgtcttactcat 356
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 881 aattataaacagttttatataaacaattaacctttctgaaaagcatgttgtcttgctcat 822
Query: 357 cccagaattttcagtttgtgaacagtgtttggcttgtgtcggatgctcaatccatcttta 416
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 821 cccagaattttcagtttgtgaacagtgtttggcttgggtcagatgctcaatccatcttta 762
Query: 417 aactcaatagaatatcacccttctaacctctaactagaatagctttgctaaagcaagaga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aactcaatagaatatcacccttctaacctctaactagaatagctttgctaaagcaagaga 702
Query: 477 tgagtttttggttttgaaaaaaagtactaggatggaacatttcctaaaagagccttagta 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tgagtttttggttttgaaaaaaagtactaggatggaacatttcctaaaagagccttagta 642
Query: 537 ctaagatacttatcttgaatatagcttgagtaagacagaaattttatcaactgataagta 596
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ctaagatatttatcttgaatatagcttgagtaagacagaaattttatcaactgataagta 582
Query: 597 aatattttatctggtgaacaaaagatacatttaaaagaatcttatatttaattcttcttt 656
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 581 aatactttatctggtgaacaaaagacacatttaaaagaatcttatatttaattcttcttt 522
Query: 657 taagacatataactgcccatttgag 681
|||||||||||||||| ||||||||
Sbjct: 521 taagacatataactgctcatttgag 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_p22.g1 MSMg01no478_p22.g1 CHROMAT_FILE:
MSMg01no478_p22.g1 PHD_FILE: MSMg01no478_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:50 2005
(629 letters)
>mm_chr5_98859991_98861019
Length = 1029
Score = 1093 bits (565), Expect = 0.0
Identities = 616/640 (96%), Gaps = 11/640 (1%)
Strand = Plus / Plus
Query: 1 acagtggaaagaagtggctgtcctcacttaacctcagtgtccctgaatggaatcagctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtggaaagaagtggctgtcctcacttaacctcagtgtccctgaatggaatcagctgg 260
Query: 61 gagacacatatgtccggacacaatgctccatgcttccctcctatgcattattcttgctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagacacatatgtccggacacaatgctccatgcttccctcctatgcattattcttgctaa 320
Query: 121 gaaggtaaatttgctttgagagggtcttgagttccagctacatctttcatgacttgtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaggtaaatttgctttgagagggtcttgagttccagctacatctttcatgacttgtgat 380
Query: 181 agagaaaagaaaaaaaaatcaacgaggcagcaattagacaagtcatgatgtagtgtgttc 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagaaaagaaaaaaaaatcaatgaggcagcaattagacaagtcatgatgtagtgtgttc 440
Query: 241 tctgatatcaaacacaatgtccctgagtcaacagtctcacaaagtgggtggtttagaagg 300
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgagagcaaacacaatgtccctgagtcaacagtctcacaaagtgggtggtttagaagg 500
Query: 301 ggattgtgactgatgaaacgaaatgttgcacaaatcactcaatcacaagaaggaatgttt 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcattgtgactgatgaaacgaaatgttgcacaaatcactcaatcacaagaaggaatgttt 560
Query: 361 caggatgactgtgtaggaaagcgtcttagataatgccttattattgttaacagacaccat 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 caggatgactgtgtaggaaagcgtcttagataatgccttattattgtgaacagacaccat 620
Query: 421 gacaagggcagctcttagaaaggaaaccacttacctggggctggcttatagttcagaggt 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 gacaagggcagctcttagaaaggaaaccacttacctggggctggcttgtagttcagaggt 680
Query: 481 ttagtccagtatcatcataatgagaagcatggcagcacaggcagatgtactgctg----- 535
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttagtgcagtatcaccataatgagaagcatggcagcacaggcagatgtactgctggagag 740
Query: 536 ------agacttctgcatctggatcagcagacagtaggaagagagagtgacactggggcc 589
|||||||||||||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 741 ttaacgagacttctgcatctggatcagcaggcagtaggaagggagcgtgacactggggcc 800
Query: 590 tggcttgaacttctgaaccctcnaagcccatgcccagtga 629
|||||||||||||||||||||| ||||||| |||||||||
Sbjct: 801 tggcttgaacttctgaaccctcaaagcccacgcccagtga 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
