Query= MSMg01no479_c16.b1 MSMg01no479_c16.b1 CHROMAT_FILE:
MSMg01no479_c16.b1 PHD_FILE: MSMg01no479_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:04 2005
(547 letters)
>mm_chr5_15546707_15547653
Length = 947
Score = 930 bits (481), Expect = 0.0
Identities = 527/549 (95%), Gaps = 12/549 (2%)
Strand = Plus / Plus
Query: 4 ggaattcattttctgagaaatgtttaggcagagacccttcttgggatgcatgataccatg 63
|||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattttctgagacatgttcagacagagacccttcttgggatgcatgataccatg 263
Query: 64 ataccacccatggtacctctctacagacatctctttacagatatgttcattcaaacttgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ataccacccatggtacctctctacagacatctctttacagatatgttcattcaaacttgc 323
Query: 124 accacataattcttctgcgattgtgaaatcaagaattatatttgtttaagaaaagtttta 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 324 accacataattcttctgcgattgtgaaatcaagaattatatttgtttaagaaaagtttca 383
Query: 184 tctggttccctaaaataactcgacacgattactatcagcatgatggaacattttgataat 243
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 384 tctggttccctaaaataactggacatgattactatcagcatgatggaacattttgataat 443
Query: 244 ttaattaaggaatgttagagtcataaatcttgcatggaggtgggaattttgggtgtattc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 444 ttaattaaggaatgttagagtcataaatcttgcatggaggtgggaattttgggcgtattc 503
Query: 304 cttttaagcaaatgcatgtgttagccaccaaggtaagggttgctactttctttcaaaata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttttaagcaaatgcatgtgttagccaccaaggtaagggttgctactttctttcaaaata 563
Query: 364 cgattaatggctaagctgtcatggttataaaatttggctttatcttgtgtaatttaaacc 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgattaatggctaagctgtcatggttataaaatttggctttatcttgtgtaatttaaacc 623
Query: 424 catgttattatctctcccttgtatgttgacattggacattggatagcgtgcttctgggtc 483
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 624 catgttattatctctcccttgtatgttgacattgga-------tagcgcgcttctgggtc 676
Query: 484 atgatccatcttgtgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtga-----agtgaagg 538
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 677 atgatccatcttgtgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgaagg 736
Query: 539 gtgctgagc 547
|||||||||
Sbjct: 737 gtgctgagc 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_c16.g1 MSMg01no479_c16.g1 CHROMAT_FILE:
MSMg01no479_c16.g1 PHD_FILE: MSMg01no479_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:04 2005
(575 letters)
>mm_chr5_15722229_15723203
Length = 975
Score = 665 bits (344), Expect = 0.0
Identities = 362/370 (97%), Gaps = 4/370 (1%)
Strand = Plus / Minus
Query: 1 acttgtcaggttgggtctgagggtagatgctgacggctctcgagagcccactggatagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 acttgtcaggttgggtctgagggtagatgctgacggctctcgagagcccactggatagat 307
Query: 61 aaccagtctagctgaactaatgcactcaggtggggagaaacatgcctcaaaaacaaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aaccagtctagctgaactaatgcactcaggtggggagaaacatgcctcaaaaacaaaaag 247
Query: 121 gagatgggcggaggatgataaggacctctaacttttgttctctatgcacacacacacaca 180
||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 246 gagattggcagaggatgataaggacctctaacttttgttctctatg----cacacacaca 191
Query: 181 cacacacacacacacacacacacacacacacacacacacaagtgcttccctctaaagagt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 190 cacacacacacacacacacacacacacacacacacacacaagtgcttccctcaaaagagt 131
Query: 241 gaggaccagagtttgttcatagagctcaggtaaaaatattgagtataaatggtatgatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gaggaccagagtttgttcatagagctcaggtaaaaatattgagtataaatggtatgatag 71
Query: 301 cataatttcagagcagggcaggtagatacagaaggatcactcatgggccactcgagccca 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 70 cataatttcagagcagggcaggtagatacagaaggatcactcatgggccactcgagccta 11
Query: 361 atttgtgacc 370
||||||||||
Sbjct: 10 atttgtgacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
