CTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCATAGTATTCTACTACAGAATGTTCCAAATATTCTGTCATATTA
CTAATATGTGATTTTTATCCTTTTTCTTTCTGCTAAGTTGCAAAAAGGTA
AGTATATTATGAAGATCTGGGTCCATATCTAGAAGTATCCTGAGCCCAGT
TTAACATCAAGGCATAGCAGAAAGATAACAATCTATTTTGAAATTAGCTC
TTTAACCACCTTTCCCAGCAGGTCTATCTCTGTCAAAAAGGAGGAAGTTT
ATAAGCTACAAAAAGATCTTCACCTGCCAATTTTCTATCATCTGAGGAGA
TGGATGCATCAGTGAAGAGACCATTGGAAGCACCATCAAGGTTAATTCTG
AGTCTGTAGGACCTTCAACTTACAGGAAGCCAAATCAGGCCAGCAGACAA
GAGCTGACAAGAAGCTTCCACAGACCACAGAAGGAAGCTCGAACTGCTGC
AATGCATACCCGCTAACCAGGCATTCCCTACATTATTTATAGAGGAATAA
ATTATCTGTTCCCAGAACAACTCCCTCAATTTAAATCTAAGAAGTAAGTT
AGAAATATCTATATAACATTACCATATTAAAAAGGGAAAAATCAAAGGCA
GACGAGTAACATGAGAAAAATGTATGTGTACATATATATATATATAACTA
ATTTTTCATGAGGTAAAACAATATGAAAGAAAAAAATGCCATTCACAGAA
AAGAACTCATGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTGCCACTAAGCATGTAGGAATAAA
ACTTCAGCCATTGATCATGATATGTGGTTGTTTTGATCCAAGTTTTCCTA
AAGACTCTTGAGGTCTGAGCATCATTTTTCTGTCATCATTGGCTTTTTCT
ACATCTGCTTTGAAGAACTATCTGCTCAAATCTCAGATGACTTTAAAAAT
TACAGCATTTTCTTTATTTTGGGGATTGTTAGAGAGTTTTGGTTTTTAAG
ACAGGGTCTTACTATGTATTTCTGGATGGTTTGAATCCACTTTATAGAAC
AGGCTGGCTTCAAACTCACAGATGTAAGATGCTTCTCCCTTCCAAGTGCT
GAGATTGCAAGTTCATGCAACCACACTGCACCACACCAGTGAGTTTTTGT
TTTTGTTTGTTTGTTTGTTTGTTTGTTTTAAAAATACACCACCATTGCTA
GATCCTTATCAGATACTGAATATATGTGCATATTGTTTCTCACTCTACAA
TGCCTTTTCACCTTCCGGGTATTGCAATATGCAGCAGAAAGCAGGTTAAA
ATTAGGTGGAATAAAATTAATCTTTTTTTTTCATTGTCTGGGGATCTTGG
TATGCTGCCTAAGAAAATTAACTAATGTATGTGTATGGAGATTTACATTT
GTCTTTCATTTTAAAGGTGATAGTTTGAGCTATTTATGTTTATATCTTTG
AGCAN

Query= MSMg01no479_g13.b1 MSMg01no479_g13.b1 CHROMAT_FILE:
MSMg01no479_g13.b1 PHD_FILE: MSMg01no479_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:23 2005
         (605 letters)



>mm_chr5_70186295_70187298
          Length = 1004

 Score = 1108 bits (573), Expect = 0.0
 Identities = 597/605 (98%), Gaps = 1/605 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctacagaatgttccaaatattctgtcatattactaatatgtgatttttatcctttttctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ctacagaatgttccaaatattctgtcatattactaatatgtgatttttatcctttttctt 745

                                                                       
Query: 61  tctgctaagttgcaaaaaggtaagtatattatgaagatctgggtccatatctagaagtat 120
            ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cctgctaagttgcaaaaa-gtaagtatattatgaagatctgggtccatatctagaagtat 686

                                                                       
Query: 121 cctgagcccagtttaacatcaaggcatagcagaaagataacaatctattttgaaattagc 180
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cctgaacccagtttaacatcaaggcatagcagaaagataacaatctattttgaaattagc 626

                                                                       
Query: 181 tctttaaccacctttcccagcaggtctatctctgtcaaaaaggaggaagtttataagcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 625 tctttaaccacctttcccagcaggtctatctctgtcaaaaaggaggaagtttttaagcta 566

                                                                       
Query: 241 caaaaagatcttcacctgccaattttctatcatctgaggagatggatgcatcagtgaaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caaaaagatcttcacctgccaattttctatcatctgaggagatggatgcatcagtgaaga 506

                                                                       
Query: 301 gaccattggaagcaccatcaaggttaattctgagtctgtaggaccttcaacttacaggaa 360
           |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 505 gaccgttggaagcaccatcaaggttaattctgagtcagtaggaccttcaacttacaggaa 446

                                                                       
Query: 361 gccaaatcaggccagcagacaagagctgacaagaagcttccacagaccacagaaggaagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gccaaatcaggccagcagacaagagctgacaagaagcttccacagaccacagaaggaagc 386

                                                                       
Query: 421 tcgaactgctgcaatgcatacccgctaaccaggcattccctacattatttatagaggaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcgaactgctgcaatgcatacccgctaaccaggcattccctacattatttatagaggaat 326

                                                                       
Query: 481 aaattatctgttcccagaacaactccctcaatttaaatctaagaagtaagttagaaatat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaattatctgttcccagaacaactccctcaatttaaatctaagaagtaagttagaaatat 266

                                                                       
Query: 541 ctatataacattaccatattaaaaagggaaaaatcaaaggcagacgagtaacatgagaaa 600
           ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 265 ctatataacattaccatattaaagaggaaaaaatcaaaggcagacgagtaacatgagaaa 206

                
Query: 601 aatgt 605
           |||||
Sbjct: 205 aatgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1004
Length adjustment: 10
Effective length of query: 595
Effective length of database: 994
Effective search space:   591430
Effective search space used:   591430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)