ATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCTTCTTGCAAATGTAGACCATGTAGAGAACAAAACTGTTCACA
ATGAAAAAATCTACAGAATGTGGGAATCCGGGCTCCAAGAGATATATCAC
ATTACAGCTTCTACATTTAATATCACAAAAGAGGGCTGGGAAGATTTTTA
AAATCTAAGAAATCTCCTGTGAAATCATCCTTTATAGAATGGCTTTATAA
CTAGGTCTGGATCAATAGTAATATCAATGGACATGTTACTGTGGAAGTAT
GAAATTTTCAGAGTTCTACTTCTCTAGTTAGAGAACTAAAGGCAACTAAT
AACTGCGGAGAGTAGGAGAATTAGCCTCTTCCATTGATGAGCCACTTATT
TATTGTCTTATACAGAGTAGTAAGGCTTGAAGCCATAAATGTATTGTCAA
CAAAATAGACTCAGTGTGTTGCATATGTGTGTGAGTTTTGTGAGTACACA
TGCATAGACATATAGATGTGTGTGAAAGCCATAATCAAAGAAAACAAACT
ATTAACTTGAGAAGAGTAGAANAACATAGGATATGTGGAAGAAGGAAAGC
ATAGGGATTAAAGTCTTTTAGCTATACTTCAACCTAAAATATTTTTTAAA
GGAAAAGGAACAAGTGCATGCATAAATAATGCAGTTAGGCCTCCTGTGTA
TATGTAGGTCATGCATGCCTAGGC

GCGATGATGTGGGAGGCCTGGGGGCCGCCTGTTTCAAAACTTAGGGTGAA
CTATAGAAGGTTACAAAAAACTGAACTTCAGTAATGCTTCTTACATGACT
GTTGGTGCCCTTCCTTTTGACGCATAGATGTTCAGAATTGAGTTATCATC
TTGATAAAATTTCACTTTGATTAGTATGAAATGTACTTCCTTGTCTCTTG
AGTAATTTAAGTTAAAAATCTATTTTATTAGATATTAGAATTTTTACTCT
AGTTTGTTTCTTGAGTTCATTTGCTTGAATAACTATTTTCTAACCCTTTA
TACTGAGATAATTACTTTCNTTGTTGCTGAGATTTTTTTTTGTATATAGC
AGAATGATGGAATACTGTTTATGCATCCATTCTGTTAGCCTGTATCTTTT
AACTGGGGAATTGTATCTATTGATACTGAAAGATATTAATGACCAATAAT
TCTTCCTTCCTGTTATTTTGATGTTAGTGGTGATTGACTGTAAGTATGTG
CAAGTTTATACATACTTTTCTCTTGTAATGGTTTTAGGAGTGTCAAATTA
CTTATATTTATTTATTGTGTTTTCTTGAGTATAATTACCCTCACGGGGTT
GTAGTTTTCCTTCTAATATGCAGGGCAGGATTCTTGGATAGGTATTGTTT
GCATTTGGNTTTTTTGCTTGTTTGTTGGTTTGGTTGGCTGGCTGGTTGCT
TAATTGCTTGTTTGGT

Query= MSMg01no480_e12.b1 MSMg01no480_e12.b1 CHROMAT_FILE:
MSMg01no480_e12.b1 PHD_FILE: MSMg01no480_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:32 2005
         (590 letters)



>mm_chr5_80085752_80086743
          Length = 992

 Score =  700 bits (362), Expect = 0.0
 Identities = 387/396 (97%), Gaps = 4/396 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcttc-ttgcaaatgtagaccatgtagagaacaaaactgttcacaatg-aaaaa 62
           |||||||||||  || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 394 gaattctcttcactgtaaatgtagaccatgtagagaacaaaactgttcacaatgaaaaaa 335

                                                                       
Query: 63  atctacagaatgtgggaatccgggctccaagagatatatcacattacagcttctacattt 122
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atctacagagtgtgggaatccgggctccaagagatatatcacattacagcttctacattt 275

                                                                       
Query: 123 aatatcacaaaagagggctgggaagatttttaaaatctaagaaatctcctgtgaaatcat 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aatatcacaaaagagggctgggaagatttttaaaatctaagaaatctcctgtgaaatcat 215

                                                                       
Query: 183 cctttatagaatggctttataactaggtctggatcaatagtaatatcaatggacatgtta 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 cctttatagaatggctttataactaggtctggatcaatagtaatatcaatggacatgtta 155

                                                                       
Query: 243 ctgtggaagtatgaaattttcagagttctacttctctagttagagaactaaaggcaacta 302
           |||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||||
Sbjct: 154 ctgtggaagtatgaaaatttcagagttctac--ccctagttagagaactaaaggcaacta 97

                                                                       
Query: 303 ataactgcggagagtaggagaattagcctcttccattgatgagccacttatttattgtct 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ataactgcggagagtaggagaattagcctcttccattgatgagccacttatttattgtct 37

                                               
Query: 363 tatacagagtagtaaggcttgaagccataaatgtat 398
           ||||||||||||||||||||||||||||||||||||
Sbjct: 36  tatacagagtagtaaggcttgaagccataaatgtat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 992
Length adjustment: 10
Effective length of query: 580
Effective length of database: 982
Effective search space:   569560
Effective search space used:   569560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)