NACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGGAGCCG
CGGAATTCATTTCATTACTCTTCTATTTTAACAATTTTAAAAACAATACA
TTTTTTAAAAGTCTAAGAAGAAAATATTTATTCAGATATAAAATTTCAGC
CCCACTGAAAATGCCAAAATAAGTCTTTGGCAGAATGCTCTATTTCCAAC
AGTTCAGTAGTGGATTTTAAACCAGCTAGAAGAGAGAGAGAGAGAGAGAT
GCCGAGCTCTGCAGGGTAGAGTGAGGTAGCTACCGACCCCTGGCAGCACC
GCTGTGGCTAACAGTCTGCTGTTTCACCTGTCCAACGCTCTAACCTGAGG
CACACCAGGGTCAGCCCTAGCCCCAAGCCGCTCTGGTCCCTCCTCTCATG
TCCCTCCCTAGGGCTCTTCCCTTCATCCTTGTGTGTCTCTAAGCTTCTCT
CGCATTCACGCCAATGGTTTGTTTTTTTCTCTCTCTTTCTCAGAAATAAC
TTTAGCTGTTTTTTTTTTTGTTGTCCTCAGACATTCACCTGCTGTGGAAT
GCAACTAGAAAGTACTTTTTTATGAAACTATACAACCTGGCCTGCAGAAA
GTAAAAATGCCTTTGTCTTGCTTGGCTTCCTTCTATCAAACAGTTAACTA
TCTCAGGTTTGCAAAAAATAAAAAAATAAACATGGCCTAAAGACTGAAAA
CATTATAAAATATACTGATCTCTACAA

CCCGATGAAGTGGGAGGCCTGGNGGNCGCCTGTTTTCAAAACGGGGGTGA
ACTATAGAAGTACCCAAAAACAGGCGGNNCNGGANANGAGCTNANGCGAG
CCGGGGGGGGNGGTGTTGCACAGCTTGATGCACTCAGGAAGCAGAGGCAG
GAAGATCTCATTGAGTGTAAGGTCCAGTCGGGTCTACATAATAAGTTCCA
GGACAGCCAGGGATACAGAGAGAAAGAAACCCTTTCTCAAACTGTCCCTT
TCTCCCCACCAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA
AATAAATAAATAAATTTTTTTTTTCAAANAGGAAGCAGAGGGGGCGGGCT
CTGNATATAAAGCTTGTAGTATAGCCGGAGAATCTGAATTCAGATCCCCA
CCATGTAAAAGTTGAGTGCAGTAGCCTTAGTGAGTGCTCTGTAGCCTTAG
TGCTGGGGTATGGAGGTCAGCCAGTCTAGCCAAAATGGTAAGATCCAAGT
TCAATGAGAGAGTCTGTCTCAAAAAAAAAAAAATAGTGGAGAGGGTTAGA
GAGATGAGTCAGAGGTTAAAAGCATGATTCCTAGGATCCACATGGTGGCT
TACAACCACCCATAACTCCATTTCCAAGTGACCTGATGCCCCATTATTTT
ATGTGCATAGACAGACATGCAGGCAAAACACTCATAAGCATTACATGAAG
GATTGTTTTTAATAACAGTGGGAC

Query= MSMg01no480_f13.b1 MSMg01no480_f13.b1 CHROMAT_FILE:
MSMg01no480_f13.b1 PHD_FILE: MSMg01no480_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:37 2005
         (568 letters)



>mm_chr5_148332477_148333442
          Length = 966

 Score = 1009 bits (522), Expect = 0.0
 Identities = 557/570 (97%), Gaps = 6/570 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   attttaacaattttaaaaacaatacattttttaaaagtctaagaagaaaatatttattca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 attttaacaattttaaaaacaatacattttttaaaagtctaagaagaaaatatttattca 707

                                                                       
Query: 61  gatataaaatttcagccccactgaaaatgccaaaataagtctttggcagaatgctctatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gatataaaatttcagccccactgaaaatgccaaaataagtctttggcagaatgctctatt 647

                                                                       
Query: 121 tccaacagttcagtagtggattttaaaccagctagaagagagagagagagagagatgccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||
Sbjct: 646 tccaacagttcagtagtggattttaaaccagctagaagagagagagagataga--tgccg 589

                                                                       
Query: 181 agctctgcagggtagagtgaggtag-ctaccgacccctggcagcaccgctgtggctaaca 239
           ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 588 agctctgcagggtagagtgaggtaggctaccgacccctggcagcatcgctgtggctaaca 529

                                                                       
Query: 240 gtctgctgtttcacctgtccaacgctctaacctgaggcacaccagggtcagccctagccc 299
           ||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 528 gtctgctggcacacctgtccaacgctctaagctgaggcacaccagggtcagccctagccc 469

                                                                       
Query: 300 caagccgctctggtccctcctctcatgtccctccctagggctcttcccttcatccttg-t 358
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 468 caagccgctctggtccctcctctcatgtccctccctagggctctttccttcatccttgct 409

                                                                       
Query: 359 gtgtctctaagcttctctcgcattcacgccaatggtttgtttttttctctctctttctca 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gtgtctctaagcttctctcgcattcacgccaatggtttgtttttttctctctctttctca 349

                                                                       
Query: 419 gaaataactttagctgtttttttttttgttgtcctcagacattcacctgctgtggaatgc 478
           |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 348 gaaataactttagctgttttttttt--gttgtcctcagacattcacctgctgtggaatgc 291

                                                                       
Query: 479 aactagaaagtacttttttatgaaactatacaacctggcctgcagaaagtaaaaatgcct 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aactagaaagtacttttttatgaaactatacaacctggcctgcagaaagtaaaaatgcct 231

                                         
Query: 539 ttgtcttgcttggcttccttctatcaaaca 568
           ||||||||||||||||||||||||||||||
Sbjct: 230 ttgtcttgcttggcttccttctatcaaaca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 966
Length adjustment: 10
Effective length of query: 558
Effective length of database: 956
Effective search space:   533448
Effective search space used:   533448
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)