AATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTAACAATTCCCTAAAACAACATTGAGAAAACAACCTAATTACA
CAGAGGTCAGAGTGTGTGAATATTCAGGTTATCAGAGATCTACAGAATAA
AAATAAGCAAACAAACTGTGAAAATGCCAACATCCATATGGGAAACTGTA
ACTTCTTGTGAGATTCCAGTTTGTACCAATTTTAATATTAAAATTCAAAT
ATTGTGAATATTAAATATAAATATGCACAAATGGTGTGAATACTAAATTG
TATTTGAAGGCAGCAGGACAGTTTTAAAAAGTAAAACTACTTTTACAGTG
TCATATAGGAATTACAACAATGGTATTTTCAAATGATTTGAAGTCTAAAT
AAAATGTTCATATTTTTTGTTCCAATTTCATTCATTACTGGTAATTCTTG
GTTACTATCAAGTTCTCTTGTTATATGTGAATGATAAATTGTGATATGTG
AAATTTTATCCCAAGATAAAAGCAAATAACCTGCCAAATCACAGAAAGCA
TGAGTAGAGATTACATTTGAATTAATCAGTGAAACTCAGTTTAAAGTCTA
CATCGTACTTGATTATATTTAATTGCCATTACCACTAGAAAAAGTTAGAA
ACAATATGCAATTGCCAGGTTTGTGGCTAGAAGAGAAAGTAAAAGAATCT
CTGTGAAGCATAAGATGATTTTAACTTTCCATT

CACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCAGAAATTCCAAATAGACTGGACCAGAAAAGAA
ATTCCTCCCAACACATAAAAATCAGAACAACAAATGTACTAAATAAAGAT
TAAATATTAAAAGCAGTAAGGCAAAAAGTTCAAGTAACATGTAAAGGCAG
GCCTATCAGAATTACACCAGACTTTTCATCAGAGACTATGAAAGCCCGAA
GATCCTGGACAGATGTTATACAGACACTAAGAGAACACAAATGCCAGCCC
AGGCTACTATACCCAGCCAAATTTTTATATTACCATAGATGGAGAAACCA
AAGTATTCCACGACAAAACCAAATTCATACATTATCTTTCCACAAATCCA
GCCCTTCAAAGGATATTAACAGAATAAAACCAATACAAAGATGGAAAACA
CACCCTAAGAAAAGCAAGAAAGCAATCCTTCAACAAACCAAAACCAAAAC
CAAAACCAAAAAGAAAAAAGAAAAAAAAAGACAGCCACAAGAACAGAATG
CCAAGTCTTACAACAAAAATAATAGGAAGCAACAATTATTTTTACTTAAT
ATCTCTTAATATCAGTGGACTCAATTCCCCAATAAAAAAACATAGACTAA
CAAACTGGCTACACAAACAGGACCCAATATTTTACTGCTTACAGGCAACA
CATCTCANGGAAAAAGACAGACACTACCTC

Query= MSMg01no480_h20.b1 MSMg01no480_h20.b1 CHROMAT_FILE:
MSMg01no480_h20.b1 PHD_FILE: MSMg01no480_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:48 2005
         (687 letters)



>mm_chr5_82542652_82543738
          Length = 1087

 Score = 1228 bits (635), Expect = 0.0
 Identities = 653/659 (99%)
 Strand = Plus / Minus

                                                                        
Query: 29   aacattgagaaaacaacctaattacacagaggtcagagtgtgtgaatattcaggttatca 88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 aacattgagaaaacaacctaattacacagaggtcagagtgtgtgaatattcaggttatca 1028

                                                                        
Query: 89   gagatctacagaataaaaataagcaaacaaactgtgaaaatgccaacatccatatgggaa 148
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1027 gagatctacagaataaaaataagcaaacaaattgtgaaaatgccaacatccatatgggaa 968

                                                                        
Query: 149  actgtaacttcttgtgagattccagtttgtaccaattttaatattaaaattcaaatattg 208
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 967  actgtaacttcttgtgagattccagtttgtaccaattttaatattcaaattcaaatattg 908

                                                                        
Query: 209  tgaatattaaatataaatatgcacaaatggtgtgaatactaaattgtatttgaaggcagc 268
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907  tgaatattaaatatagatatgcacaaatggtgtgaatactaaattgtatttgaaggcagc 848

                                                                        
Query: 269  aggacagttttaaaaagtaaaactacttttacagtgtcatataggaattacaacaatggt 328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847  aggacagttttaaaaagtaaaactacttttacagtgtcatataggaattacaacaatggt 788

                                                                        
Query: 329  attttcaaatgatttgaagtctaaataaaatgttcatattttttgttccaatttcattca 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787  attttcaaatgatttgaagtctaaataaaatgttcatattttttgttccaatttcattca 728

                                                                        
Query: 389  ttactggtaattcttggttactatcaagttctcttgttatatgtgaatgataaattgtga 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727  ttactggtaattcttggttactatcaagttctcttgttatatgtgaatgataaattgtga 668

                                                                        
Query: 449  tatgtgaaattttatcccaagataaaagcaaataacctgccaaatcacagaaagcatgag 508
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 667  tatgtgaaattttatcccaagataaaagcaaataacctgccaaatcacagaatgcatgag 608

                                                                        
Query: 509  tagagattacatttgaattaatcagtgaaactcagtttaaagtctacatcgtacttgatt 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607  tagagattacatttgaattaatcagtgaaactcagtttaaagtctacatcgtacttgatt 548

                                                                        
Query: 569  atatttaattgccattaccactagaaaaagttagaaacaatatgcaattgccaggtttgt 628
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 547  atatttaattgccattaccactagaaaaaggtagaaacaatatgcaattgccaggtttgt 488

                                                                       
Query: 629  ggctagaagagaaagtaaaagaatctctgtgaagcataagatgattttaactttccatt 687
            |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487  ggctagaagagaaaataaaagaatctctgtgaagcataagatgattttaactttccatt 429


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space:   729129
Effective search space used:   729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)