XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGTTGTGTTACTTTCATGACAATTCTTTCAAGAGAAGTATAAAA
ATACCTATGAATTTCTGAAAATTTGTGAATGAGTTGCTTTATACCTTAAT
TACAATAAACGCCAGAGTCAGAGGCTGTTCACAGTATACTCATCTCGTTT
TTGGGTCATCCATTAATGTGTGCCTACTCAACTTCCTGCTATGTCCTGTT
TTAGGGAGCATCTCATTTCAGGGTGTCTGTCTCCTGGAGTTTCCCTGGAG
TCTTCTACATATGAGTCAGCATGGCCTTCCTTGTTGGGCTGATTTAGCAG
TAAACTTTACTTGCTAGTCAACCAAAATGTAAAGTCTGTCCTTGTCAGTT
TCTCTGGAGTAAATTTTGAAGATGCTTCTATAATGAAAATTGTCATTCTC
CTCAAAGTCTCAAATATTAAAATCCAGTTACATGTGTGGCATTTAAGTTG
AGCATTTTGGTCTCTTTTTTGTTACGGTTGTTGTTTTTGATGATGATGAT
GATGTTATATGTTGCTGTTTTCCACAAATGTAGGTATTTTGGAATCTGAT
TGTGGAAATCACATCAACAAATAGAAGCATTTCTGTATTCCTATAGATCC
AGTTAAAATTTGAATTTTAGAATATATGCTTTGCATCTGATCCTAATTGC
ACTTTTCTTAACTGAATTTTTTGGCAAGAAAT

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTCATCTGATTCAGAGCTACTAAGAGCTG
GCTCCTTGAGCTCATCTAGTGATGGGTATAGGCTCCTTCTCCTAGAGACC
TCCACTAATTGATCTTTTTTCTTTTCTTTTTTCTTCTCCTTCCTTCCAAT
CTCTCCCCAGGTATTCTTACCTGACCTAAACTTTTCCTCGGGTTCAAGAC
CAGTGGAAAGGCCTGTATATTTATTTTGTGTACCATATTTCCTCTTTGCT
CCTACTCTCTCTCCCCGCTTTACTTCTGATAGATTGTCTTGAATTTCATC
CAGAATCCGCCCTGCCTTAACCACTTGATAACATGTGAAAAGGAACAAAA
AGGCTCCTAACACTAGAGAAAGTTCAAGGCCAAACATACCTTGTAAAGCT
ATTTCCCACTTTACTTCTGATAGGCTGTCTTGAATTTCGTTAGAAAGTTC
AAGGCCAGACGTACCTTGTAAAGCTATTTCCCACTTTACTTCTGATAGAC
TGTCTTGAATTTCGTTAGAAAGTTCAAGACCAGATTTACCTTGTAAAGCT
ATACTTACGGGTACCCTGTTCCCCAGCTGAAGAGTTCTGAATCCACGCAG
TTGAATCCTTCTCAACAGTCTGTTTTATGGGAACATTTCATTACCACCGT
TCCTCAGCTGAAGAGTTCTGAATCCACACCGGATCCTTCTCAACA

Query= MSMg01no481_e01.b1 MSMg01no481_e01.b1 CHROMAT_FILE:
MSMg01no481_e01.b1 PHD_FILE: MSMg01no481_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:50 2005
         (681 letters)



>mm_chr5_47386914_47387997
          Length = 1084

 Score = 1222 bits (632), Expect = 0.0
 Identities = 667/680 (98%), Gaps = 3/680 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaagttgtgttactttcatgacaattctttcaagagaagtataaaaatacctatg 64
           ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gaattcaagttgtgaaaatttcatgacaattctttcaagagaagtataaaaatacctatg 825

                                                                       
Query: 65  aatttctgaaaatttgtgaatgagttgctttataccttaattacaataaacgccagagtc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 aatttctgaaaatttgtgaatgagttgctttataccttaattacaataaacgccagagtc 765

                                                                       
Query: 125 agaggctgttcacagtatactcatctcgtttttgggtcatccattaatgtgtgcctactc 184
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 764 agaggctgttcacagtatactcatctcctttttgggtcatccattaatgtgtgcctactc 705

                                                                       
Query: 185 aacttcctgctatgtcctgttttagggagcatctcatttcagggtgtctgtctcctggag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 aacttcctgctatgtcctgttttagggagcatctcatttcagggtgtctgtctcctggag 645

                                                                       
Query: 245 tttccctggagtcttctacatatgagtcagcatggccttccttgttgggctgatttagca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tttccctggagtcttctacatatgagtcagcatggccttccttgttgggctgatttagca 585

                                                                       
Query: 305 gtaaactttacttgctagtcaaccaaaatgtaaagtctgtccttgtcagtttctctggag 364
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gcaaactttacttgctagtcaaccaaaatgtaaagtctgtccttgtcagtttctctggag 525

                                                                       
Query: 365 taaattttgaagatgcttctataatgaaaattgtcattctcctcaaagtctcaaatatta 424
           ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 524 taaattttgaagatgtttctatactgaaaattgtcattctcctcaaagtctcaaatatta 465

                                                                       
Query: 425 aaatccagttacatgtgtggcatttaagttgagcattttggtctcttttttgttacg--- 481
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 464 aaatccagttacatgtgtggcatttaagttgagcattttggtctcttttttgttacggtt 405

                                                                       
Query: 482 gttgttgtttttgatgatgatgatgatgttatatgttgctgttttccacaaatgtaggta 541
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gttgttgtttttgacgatgatgatgatgttatatgttgctgttttccacaaatgtaggta 345

                                                                       
Query: 542 ttttggaatctgattgtggaaatcacatcaacaaatagaagcatttctgtattcctatag 601
           |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 344 ttttggaatctgattgtggaaatcacatcaacaaatagaagcctttctgtagtcctatag 285

                                                                       
Query: 602 atccagttaaaatttgaattttagaatatatgctttgcatctgatcctaattgcactttt 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 atccagttaaaatttgaattttagaatatatgctttgcatctgatcctaattgcactttt 225

                               
Query: 662 cttaactgaattttttggca 681
           ||||||||||||||||||||
Sbjct: 224 cttaactgaattttttggca 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1084
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1074
Effective search space:   720654
Effective search space used:   720654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)