Query= MSMg01no482_k05.b1 MSMg01no482_k05.b1 CHROMAT_FILE:
MSMg01no482_k05.b1 PHD_FILE: MSMg01no482_k05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:35 2005
(627 letters)
>mm_chr5_7710932_7711958
Length = 1027
Score = 659 bits (341), Expect = 0.0
Identities = 350/353 (99%)
Strand = Plus / Minus
Query: 1 taaaatatggttcacaaaacatctctttcagacccaagacggtaactcctgttagaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 taaaatatggttcacaaaacatctctttcagacccaagacggtaactcctgttagaacac 294
Query: 61 tataaacatatgttacatcaccaaggtggaagaattaaactgtttttctatggttgagtt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 293 tataaacatatgttacatcaccaaggtggaagaattaaactctttttctatggttgagtt 234
Query: 121 gaaagtgaatcatcagaaaatggatataccaccatagaagtattggagataatatatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gaaagtgaatcatcagaaaatggatataccaccatagaagtattggagataatatatgtc 174
Query: 181 aacataataaaaggctatatataacttctacccaacctttcaccaaaaatggagaaaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aacataataaaaggctatatataacttctacccaacctttcaccaaaaatggagaaaaac 114
Query: 241 ttgttgttattccattaaaattaggaaaaagacagagctgtccaccatactctttccttt 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ttgttgcaattccattaaaattaggaaaaagacagagctgtccaccatactctttccttt 54
Query: 301 tcaatggaatattggaaacagcagctagagcaataaggcaagaaaacgaaatt 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tcaatggaatattggaaacagcagctagagcaataaggcaagaaaacgaaatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_k05.g1 MSMg01no482_k05.g1 CHROMAT_FILE:
MSMg01no482_k05.g1 PHD_FILE: MSMg01no482_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:35 2005
(227 letters)
>mm_chr5_7543476_7544102
Length = 627
Score = 437 bits (226), Expect = e-127
Identities = 226/226 (100%)
Strand = Plus / Plus
Query: 1 aggaggtcgcttggtgtcgaatgctcttaccaagtgagccatcaaactggcctcactgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaggtcgcttggtgtcgaatgctcttaccaagtgagccatcaaactggcctcactgtt 260
Query: 61 taaacctagagagcaataaaaagagacagggctgctgggggtgtctctgttaggaaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaacctagagagcaataaaaagagacagggctgctgggggtgtctctgttaggaaagca 320
Query: 121 gcctgatcaaagttcctaggagatttcttggctggttttaattctgccatcaagtccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctgatcaaagttcctaggagatttcttggctggttttaattctgccatcaagtccatg 380
Query: 181 gtcctattcataaatattaaaaatggaaaattcaggaagagcatga 226
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcctattcataaatattaaaaatggaaaattcaggaagagcatga 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 627
Length adjustment: 9
Effective length of query: 218
Effective length of database: 618
Effective search space: 134724
Effective search space used: 134724
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
