NACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGAGAGGG
CGGAATTCAGACAACTTGCAAAAACCATCCAAATATATGATATTATGGTT
TCCATTCCTATTCTAAACATCTTCAAGTATATAATTTACCTTTAACTCAA
GTCAAGCTTTGGACACTTCTACTGCTCCTCTGAACAGAGGACAATTTAAA
AAAACATATAAAACCTTGTATAGGCCAAATAATCTGTCAAGTAAGACTTT
AAATACCACCGGGATAATTAAAATATTTTTTCTAATCTTTGAAGACAAAG
TCAATGTTGAGCAATGTTCATGCTTTTTCAGCCACATAGTTCTAAAAGTC
AAGTCACTCTGCCTGTGCTAATGAGAAAAATCCTTCTGATGAACTATTTA
ATTGGGTTTAACAAGGCTGTTTATAGCTAATCCTAAATGCACTAATAAGA
ATCTGAAGGCCTATACTCAATGTTAGTTTTAGTCCCTTTAGATCTGGCTC
ATAATTACAGTTTGCTCTTTAATTATTCCGCTTCTCATTTTCAATTTATG
ATTAAGACCAACAGGGTGCCCTGGAGACACCAATTGCTGAGCTGGACAGG
AATAAAAGAGAGGACAGCAATTCCTTTGGCCAGCTGGCCCAGGTGGTCAA
TATAGATTTCGTTCTGTTTAATTGTAAACAAATTGTTCAAAATAAACCCA
AAAATCATGCGATTTTGGAACCTAATTTCTATCATCCCCAAAGTATTATT
TAATGGCATTTTTAT

AAAACACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACACTAAAAAGCTGAGACAG
AATTGTGAGTTGAGAGACATCCTGAGCTACAAAATAGTGTGAATGTGAAA
ATCTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCCTCTGTATGTG
TGCACGTATGTGCCTCTGCGTGTGTGGGACTTTCTTGATCTGTGAGAGAT
CCTTCCATTTGAAATATGGATTTCGTGTTATTTAATTCCGTTAGAGTTAG
AGATATAATATTCAATTGATAAAACTTGATAAAACTTACGTGGTTTAAAA
CAGGTAAATTGTGTGTGACATGGACAGAGTGTGTGAATTGATGTCTGGAT
GCATCACAATATTATCATTTTCTTTAATCAACAGCCTACCTTCCAGGGAG
TATGCTAGCATTCAATCAGAATTAGCACACTCCAGAGTGCAGTGTTGTGC
GTATTTCAACTAGGGTTACCACCAGAGCTTTGGTAATCTTCATGATAAAT
ATGAGAAATCTTTTTAGAGTTATATGTTAGCCCAATAAATATCGAAATAC
ACTGTTATATACTAAATGAAGTGCAATGAATATTCTGGCGGTGCTCAGAG
ACAAAGGGAAATGTCCACCTTATTTTGGAAGACATGTG

Query= MSMg01no484_l24.b1 MSMg01no484_l24.b1 CHROMAT_FILE:
MSMg01no484_l24.b1 PHD_FILE: MSMg01no484_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:26 2005
         (620 letters)



>mm_chr5_59563819_59564840
          Length = 1022

 Score = 1094 bits (566), Expect = 0.0
 Identities = 608/622 (97%), Gaps = 2/622 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaatatatgatattatggtttccattcctattctaaacatcttca-agtatataatttac 59
           ||||||||||| ||||||  ||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 822 aaatatatgatcttatggggtccattcctattctaaacatcatcacagtatataatttac 763

                                                                       
Query: 60  ctttaactcaagtcaagctttggacacttctactgctcctctgaacagaggacaatt-ta 118
           ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 762 ctttaactcaattcaagctttggacacttctactgctcctctgaacagaggacaattaaa 703

                                                                       
Query: 119 aaaaaacatataaaaccttgtataggccaaataatctgtcaagtaagactttaaatacca 178
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aaaaaacatataaaaccttgtgtaggccaaataatctgtcaagtaagactttaaatacca 643

                                                                       
Query: 179 ccgggataattaaaatattttttctaatctttgaagacaaagtcaatgttgagcaatgtt 238
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ctgggataattaaaatattttttctaatctttgaagacaaagtcaatgttgagcaatgtt 583

                                                                       
Query: 239 catgctttttcagccacatagttctaaaagtcaagtcactctgcctgtgctaatgagaaa 298
           ||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 catgcataaccagccacatagttctaaaagtcaagtcactctgcctgtgctaatgagaaa 523

                                                                       
Query: 299 aatccttctgatgaactatttaattgggtttaacaaggctgtttatagctaatcctaaat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aatccttctgatgaactatttaattgggtttaacaaggctgtttatagctaatcctaaat 463

                                                                       
Query: 359 gcactaataagaatctgaaggcctatactcaatgttagttttagtccctttagatctggc 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gcactaataagaatctgaaggcctatactcaatgttagttttagtccctttagatctggc 403

                                                                       
Query: 419 tcataattacagtttgctctttaattattccgcttctcattttcaatttatgattaagac 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcataattacagtttgctctttaattattccgcttctcattttcaatttatgattaagac 343

                                                                       
Query: 479 caacagggtgccctggagacaccaattgctgagctggacaggaataaaagagaggacagc 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 caacagggtgccctggagacaccaattgctgagctggacaggaataaaagagaggacagc 283

                                                                       
Query: 539 aattcctttggccagctggcccaggtggtcaatatagatttcgttctgtttaattgtaaa 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aattcctttggccagctggcccaggtggtcaatatagatttcgttctgtttaattgtaaa 223

                                 
Query: 599 caaattgttcaaaataaaccca 620
           ||||||||||||||||||||||
Sbjct: 222 caaattgttcaaaataaaccca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1022
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1012
Effective search space:   617320
Effective search space used:   617320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)