NNNNAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTCATGTGTGTCTCACTTACTTGCAGTTTAAAAGTTGC
ATTGTGTTTTTAAAGGGACATAAAAACAATCACAACAAATTAGGCATGGC
TACCACACACATCCTTGATGCAGGAAAACTACTAGGCAAGCACTTAAATA
TTTTCCTTCTTGAAAAGCCTGAAAAGGAACCCTCACCCTCAGCTTTAAAC
CAAGAAGCTTAACTTAAATAACTGTCATTTATCTCTAAGAGTTAGACTAT
GCATTCAGAGTTACTGTTTAATGATTACTTTTTATTGACTCGAAGCACAC
AGCATGTGTGAGAGCTTAGGTTTCACAGCAAGGTGACTCTTCTTAGAAAG
ACGCTGCAGAGTGCTGTGCAGAGCGGATGTGGTCTGTGTTCCATTTCGAT
ATGTGTGTTCCTTTATTCTTTCTCTTAAGGCCTCGATTTCTATCACAGAA
AAGAAGGGCATTTTTCTAATGTTTTGTGGGCTCAGGAAAGTTTTGAGAAG
GATGTCCTAAAACAAATGCCTAAATCTGTCACTGTCACTAGAGCCTGTGA
TTTCTGACATAAAGCAACCAAATATAATTAAACAGTGTGGGCTGTGGCTG
GGACTTCTTCCTTGCTGTTTTCCATCAATGGCTAATATATCTGGACATGA
AGCTGCTCTTCTAACCTACAATTACTTCCACA

NNNNNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGATGTATCTTTTTTTCCA
GCCAGCCAGAGGAGGCATACACTAATACCAGCGCTTTGAAAGTAGAGGCA
ATTTTCTGAGGAACCGCCAGACTGATTTCCAGAATGGTTGTACAAGCTTG
CAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCA
GCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGA
GATGGAATCTCAGGGTTGTTTTGATTTGCATTTCTCTGATGATTAAGGAT
GTTGAACATTTTTTCAGGTGTTTCTCAGCCTTTCAGTATTCCTCGGGTGA
GAATTCTTTGTTCAGCTCAGAGCCCCATCTTTTAAGGGGGCTATTTGATT
TTCTGGAGTCCACCCTCTTGAGTTCTTTATATATATTGGATATTAGTCCC
CTATCTGATTTAAGATAGGTAAAGATCCTTTCCTAATCTGTTGGTGGCCT
TTTTGTCTTATTGATGGTGTCTTTTGCCTTGCAGAAGCTTTGCAGTTTCA
TGAGGTCCCATTTGTCAATCCTCGATCTTACAGCACAAGCCATTGCTGTT
CTGTTCAGGAATTTTTTCCCTGTGCCCATATCTTCCAGACTTTTCCCCAC
TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA
TCCACTTAGATTT

Query= MSMg01no485_a19.b1 MSMg01no485_a19.b1 CHROMAT_FILE:
MSMg01no485_a19.b1 PHD_FILE: MSMg01no485_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:51 2005
         (650 letters)



>mm_chr5_18793802_18794851
          Length = 1050

 Score = 1151 bits (595), Expect = 0.0
 Identities = 637/655 (97%), Gaps = 10/655 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgcagtttaaaagttgcattgtgtttttaaagggacataaaaacaatcacaacaaatta 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 850 ttgcagtttaaaagttgcattgtggttttaaagggacataaaaacaatcacaacaaatta 791

                                                                       
Query: 61  ggcatggctaccacacacatccttgatgcaggaaaactactaggcaagcacttaaatatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 790 ggcatggctaccacacacatccttgatgcaggaaaactactaggcaagcacttaaatgtt 731

                                                                       
Query: 121 ttccttcttgaaaagcctgaaaaggaaccctcaccctcagctttaaaccaagaagcttaa 180
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 730 ttccttcttgaaaagcctgaaaaggaaccctcaccctcagctgaaaaccaagaagcttaa 671

                                                                       
Query: 181 cttaaataactgtcatttatctctaagagttagactatgcattcagagttactgtttaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cttaaataactgtcatttatctctaagagttagactatgcattcagagttactgtttaat 611

                                                                       
Query: 241 gattac----tttttattgactcgaagcacacagcatgtgtgagagcttaggtttcacag 296
           ||||||        |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 610 gattacacag----tattgacttgaagcacacagcatgtgtgagagcttaggtttcacag 555

                                                                       
Query: 297 caaggtgactcttcttagaaagacgctgcagagtgctgtgcagagcggatgtggtctgtg 356
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 caagatgactcttcttagaaagacgctgcagagtgctgtgcagagcggatgtggtctgtg 495

                                                                       
Query: 357 ttccatttcgatatgtgtgttcctttattctttctcttaaggcctcgatttctatcacag 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttccatttcgatatgtgtgttcctttattctttctcttaaggcctcgatttctatcacag 435

                                                                       
Query: 417 aaaagaagggcatttttctaatgttttgtgggctcaggaaagttttgagaaggatgtcct 476
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 434 aaaagaagggcatttttctaatgttttgtgggctcaggaaag-tttgagaaggatgtcct 376

                                                                       
Query: 477 aaaacaaatgcctaaatctgtcactgtcactagagcctgtgatttctgacataaagcaac 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aaaacaaatgcctaaatctgtcactgtcactagagcctgtgatttctgacataaagcaac 316

                                                                       
Query: 537 caaatataattaaacagtgtgggctgtggctgggacttcttccttgctgttttccatcaa 596
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 315 caaatataattaaacagtgtgggctgtggctgggacttcttcattgctgttttccatcaa 256

                                                                  
Query: 597 tggctaatatatctggacatgaagctgctcttct-aacctacaattacttccaca 650
           ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 255 tggctaatatatctggacatgaagctgttcttctaaacctacaattacttccaca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)