Query= MSMg01no485_p23.b1 MSMg01no485_p23.b1 CHROMAT_FILE:
MSMg01no485_p23.b1 PHD_FILE: MSMg01no485_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:10 2005
(654 letters)
>mm_chr5_123982256_123983306
Length = 1051
Score = 1174 bits (607), Expect = 0.0
Identities = 639/651 (98%), Gaps = 3/651 (0%)
Strand = Plus / Plus
Query: 4 ggaattcagggtcacttgctacatagggagttggagactagccttggctacagttagtaa 63
|||||||| |||||||||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 204 ggaattcaaggtcacttgctacaaagggagttggaggctagccttggctacagtgagtaa 263
Query: 64 gactcaccccatcttctgctacacacacaggaatgtatgtttagtatgtgtgaagcctgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gactcaccccatcttctgctacacacacaggaatgtatgtttagtatgtgtgaagcctgg 323
Query: 124 gtttaatttcctagaccaataaacaaacaatcaaacaccctcactatgtagcaattaaaa 183
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 324 gtttaatttcctagaccaataaacaaacaaacaaacaccctcgctatgtagcaattaaaa 383
Query: 184 agaatcaggatggggcaccaggacagctcttagaagcccttgctgagcagtaggtgggtt 243
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 384 agaatcaggatggggcaccaggacagctcttaggagcccttgctgagcagtaggtgggtt 443
Query: 244 tgaggggaggaagaccagactagtgatgagctaacacactgcctatgtaacgtacatact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaggggaggaagaccagactagtgatgagctaacacactgcctatgtaacgtacatact 503
Query: 304 tagcagcatcacactagtgatgaatggaaagccaagagaagcgctgcagaccaggaacac 363
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tagca---tcacactagtgatgaatggaaagccaagagaagcgctgcagaccaggaacac 560
Query: 364 agcccctgagtaactggacgcctacatgcctcctggagggactaaaacctggccacatgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcccctgagtaactggacgcctacatgcctcctggagggactaaaacctggccacatgg 620
Query: 424 gtgcctctgtgaggaacagggtagctgtggcaggagctgctccccttcctggagcatagc 483
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgcttctgtgaggaacagggtagctgtggcaggagctgctccccttcctggagcatagc 680
Query: 484 tagctggtttgcgtatgctggatgttcctcatgtccccacacttctcccaggggcctgtg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagctggtttgcgtatgctggatgttcctcatgtccccacacttctcccaggggcctgtg 740
Query: 544 ccagcactcacatgacttgtgtttgggctgggcaatgggaggtcccagggacaactagag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccagcactcacatgacttgtgtttgggctgggcaatgggaggtcccagggacaactagag 800
Query: 604 aatggagagcagtatggagcttgtcttgtctagccctggcctctggtctgt 654
||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 801 aatggagagcagtatggggcttgtcttgtctagccctggcctctggtctgt 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1051
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1041
Effective search space: 670404
Effective search space used: 670404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_p23.g1 MSMg01no485_p23.g1 CHROMAT_FILE:
MSMg01no485_p23.g1 PHD_FILE: MSMg01no485_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:10 2005
(269 letters)
>mm_chr5_124168916_124169584
Length = 669
Score = 509 bits (263), Expect = e-149
Identities = 266/267 (99%)
Strand = Plus / Minus
Query: 1 agtaacggttctttattgttgacttaggggtataaaggaattctggtaagtgggttaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agtaacggttctttattgttgacttaggggtataaaggaattctggtaagtgggttaaat 408
Query: 61 gtctaaacagacttagtgggtctttttcctgaatccagaaatttttgcttgacaattcag 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 407 gtctaaacagacttagtgggtctttttcctcaatccagaaatttttgcttgacaattcag 348
Query: 121 agaagcaagttagacccagctgttcatatttaacacatttctggtaagataaaataagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 agaagcaagttagacccagctgttcatatttaacacatttctggtaagataaaataagtt 288
Query: 181 tacagttatgttagccgatgatttctttacagctgttattattactgttgttattattgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tacagttatgttagccgatgatttctttacagctgttattattactgttgttattattgg 228
Query: 241 tggtggttggttggtgggattttgttt 267
|||||||||||||||||||||||||||
Sbjct: 227 tggtggttggttggtgggattttgttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
