TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTCTTACTACCAGTTGAACATGCTATGGATCATTTTTTTTTTTTT
TTTTTTTGGGTTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGGC
CTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAA
GGCGTGTGCCACCACGCCCGGCGTGGATCATTTTTATATATGGTCTCATC
TTTTCTCAAATTTAACTGTTATCAACAAGCCACACCTTTTACTGTTGTTA
TCTCATGGTTTAAATTCCCACGAATGAAAACCATAGATTTTGAAGGAGTA
CATACATCCAAGTCTTATAATTATTTTATCCATGCCTAGTACTTAATGAT
TGACTATGTAGATTTATAATTTTGTTTTTGGTTCTGCAGAATGTTATAAT
AAATGTCATATTTTTATATATAATTGCTTTGAAATGTTTATATCCCTCAG
GCTCATTAATTTCGTCTTACCTCTGCAAAATATTATGCATTGCATAACCA
AGGGAGCTTAAGATGGTATTGTATAATATCTTCTTAGAAAAATGGCTAAT
ATAATAATGTATGGTTATTTTGTTTTTGCTGTTGTTGTTTACTTGAAATA
CTGACGATCACTATCATAGATCTTACAGGTAGTGCTAAAGGGACACTATT
AAAACATAATTTTCTTAGATATTTCTGGTTATAATAAAAAAATAATTGGN
TATTTAGTGATATATATATATT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCACAGTAAAACCAAGAGAGTCAAC
TAACGTGGACCCTTGGACCTCTTAGAATCTGAATCATCAGCCAAAAAAAC
ATACACCTAGGTATCCTTGCACATATTTAACAGATGTGCAGCTTGGTCTT
CATGTGGGTCCTGAACAACTGGAATGGTGGCTAGCTGTTGCCTGTCTTTG
GTATATGTTCTAGCTGCATTGCTTTGTCTGCCTTCAGTAGGAGAGTATAC
ACCTCTACCTTAACAGGATTTATTTGCAGTGGAGACCAGATCAGATCAGA
AGAAAAGGGCATGGGGATGGTGGAAGGATTGTGGGAGAAGGGGACCAAGA
GGTAGTCAGTGACCTTGATGTAAAGTGAATAAGTAAATAAAATTAAATTT
AAAAAATAATCACATAAAATATATATTAAGTGTACTTTTTATAAAACTAA
TGATAATAAAATGCATATCTTGGAAAAAAGAAACAAAAACAGGAGACAGA
GGAAAGGAAATTTAGTGGGGAGGATAATTTGTCCTGGAGGACAAAAAACT
GCCTCTAGATAGAGAAGAGACAGACATGCACACAGGAAAATGAGAGGTTA
GAAAGATAAAACAGATAAGCCCAAGTTAGCATGAGGTGTTGAATTCTAAT
TGGGACATGTTAATTAAGTGATTCAAGGATCTTTTGATTGCTGTACTTCA
TACATTTATAACTGGN

Query= MSMg01no487_g18.b1 MSMg01no487_g18.b1 CHROMAT_FILE:
MSMg01no487_g18.b1 PHD_FILE: MSMg01no487_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:02 2005
         (635 letters)



>mm_chr5_60014661_60015693
          Length = 1033

 Score =  760 bits (393), Expect = 0.0
 Identities = 440/457 (96%), Gaps = 4/457 (0%)
 Strand = Plus / Minus

                                                                       
Query: 180 tggatcatttttatatatggtctcatcttttctcaaatttaactgttatcaacaagccac 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 833 tggatcatttttatatatggtctcatcttttctcaaatttaactgttatcaacaagtcac 774

                                                                       
Query: 240 accttttactgttgttatctcatggtttaaattcccacgaatgaaaaccatagattttga 299
           ||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 773 accttttactgttgttacctcatggtttaaattcccacaaatgaaaaccataaattttga 714

                                                                       
Query: 300 aggagtacatacatccaagtcttataattattttatccatgcctagtacttaatgattga 359
           ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 713 aggagtacatacatccaagtcctataattattttatccatgcctaatacttaatgattga 654

                                                                       
Query: 360 ctatgtagatttataattttgtttttggttctgcagaatgttataataaatgtcatattt 419
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 653 ctatgtagatttataattttgtttttggttctgcagaatgttataataaacgtcatattt 594

                                                                       
Query: 420 ttatatataattgctttg-aaatgtttatatccctcaggctcattaatttcgtcttacct 478
           |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |
Sbjct: 593 ttatatataattgctttgaaaatgtttatatccctcaggctcattaatttcatcttactt 534

                                                                       
Query: 479 ctgcaaaatattatgcattgcataaccaagggagcttaagatggtattgtataatatctt 538
           |||||||||||||||||||||||||||||||||| |||||||||||||||   |||||||
Sbjct: 533 ctgcaaaatattatgcattgcataaccaagggagtttaagatggtattgt---atatctt 477

                                                                       
Query: 539 cttagaaaaatggctaatataataatgtatggttattttgtttttgctgttgttgtttac 598
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 476 cttagaaaaatggctaatataaaaatgtatggttattttgtttttgctgttgttgtttac 417

                                                
Query: 599 ttgaaatactgacgatcactatcatagatcttacagg 635
           |||||||||| ||||||| ||||||||||||||||||
Sbjct: 416 ttgaaatactcacgatcattatcatagatcttacagg 380


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1033
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1023
Effective search space:   639375
Effective search space used:   639375
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)