NATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTATCCTTTATGCATGGAAGCAGAAAAAAAAATTGATTTTTACA
TTGTGTCCTTTTTGTATCTTCATCTAAGGGTTATTAAATCAAATTAAATA
CCAACTGAATATTCTTCCTTTTAGGACTCTATACATCTAAATCATAAGGA
GTTTAAGAAAATGTATTTTTTTTAGAATTAATTTTTTTATTAGGTATTTT
CCTCATTTACATTTCCAATGCTATCCAAAAAGTCCCCAATACACTCCCCC
CCCACCACTCCTCTACCCACCCACTCCCACTTTTTGGCCCTGGCGTTCCC
CTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGACTGTCTTTCCAC
TGATGGCCGACTAGGCCATCTTTTGATACATATGCACCTAGAGTCAAGAG
CTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGTTGCAGA
TCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTG
TGATCCATCCAATAGCTGACTGTGAGCATTCACTTCTGAGTTTGCTAGGC
CCCGGCATTGTCTCAAAAGAGACAGCTATATCTGGGTCCTTTAAGTAAAA
TCTTGCTAGTGTATGCAATGATGTCAGCGTTTGAAAGCTGATTATGGGAT
GGATCCCTGGATATGGCAGTCTTTAGATGGTCCATCCTTTCGTCACAGCT
CCAAACTTTN

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTTGCCCGAGGAATTCATTTGTCACACGCCACTTAGCATAT
CTATAACTTTCCCCCGAAGAAACGCCATCTCCAAGTAATTATTTTAATGG
GTGAAGGATTAAATGCTAAAATAATAAGAAATCGAAGGGAAAGTGAAAGA
CAATTATATGCTGTCTCTTAAGACAGAAATGAATTTCACCTGAAGGCGAA
ATCTGTTTTCTCTAAAGAGTTTAAGAAAATACATATAAACAGAGAAAATA
AGTGGTATTCCACATAATTTATTCTGGGTTTCATCTGCATCTGGAGGTAA
GGTCTTTGTACAGGACAGGAGTATTTATCATGTCTAACCTATTTCAGTTT
ACAGGACCTTTGATACGAATGATCTGAGTCACTGAAACTGATGAGCACAT
ATGTAAAAATACACATCTCATCAGCTGCATATCATTTTGAAAACAAATCT
GTAAATCTCATTGTTCACCTTACACCCAACTGGGGCTCACTTGGTTGGAC
AGAAATAAGTACTTTATTAATGCATGGAATTATGTGTGGTGGTTCATACT
GATGGTTTTATTAATCCCAATCACTGTGGAACACAAATAAATTATGCTCC
GGAATATATCTATATATATAATAGATGTATATATATAGATATATTCTAGA
TTTACATGTATGTATATCATAAATAGCGCGTGATGTCCGGCGGCGGCTTT
TGCCGTTACGC

Query= MSMg01no487_i18.b1 MSMg01no487_i18.b1 CHROMAT_FILE:
MSMg01no487_i18.b1 PHD_FILE: MSMg01no487_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:11 2005
         (711 letters)



>mm_chr5_83886711_83887820
          Length = 1110

 Score = 1237 bits (640), Expect = 0.0
 Identities = 691/708 (97%), Gaps = 4/708 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctatcctttatgcatggaagcagaaaaaaaaattgatttttacattgtgtccttt 64
           ||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatcctttaggaatggaagcag-aaaaaaaattgatttttacattgtgtccttt 263

                                                                       
Query: 65  ttgtatcttcatctaagggttattaaatcaaattaaataccaactgaatattcttc-ctt 123
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 264 ttgtatcttcatctaagggttattaaatcaaattaaataccaactgaatattcttcac-t 322

                                                                       
Query: 124 ttaggactctatacatctaaatcataaggagtttaagaaaatgtattttttttagaatta 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttaggactctatacatctaaatcataaggagtttaagaaaatgtattttttttagaatta 382

                                                                       
Query: 184 atttttttattaggtattttcctcatttacatttccaatgctatccaaaaagtccccaat 243
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atttttttattagatattttcctcatttacatttccaatgctatccaaaaagtccccaat 442

                                                                       
Query: 244 acactccccccccaccactcctctacccacccactcccactttttggccctggcgttccc 303
           |||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 443 acactccccctcc-ccactcctctacccacccactcccactttttggcgctggcgttccc 501

                                                                       
Query: 304 ctgtactggggcatataaagtttgcaagtccaatgggactgtctttccactgatggccga 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctgtactggggcatataaagtttgcaagtccaatgggactgtctttccactgatggccga 561

                                                                       
Query: 364 ctaggccatcttttgatacatatgcacctagagtcaagagctctggggtactggttagtt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctaggccatcttttgatacatatgcacctagagtcaagagctctggggtactggttagtt 621

                                                                       
Query: 424 cataatgttgttccacctataggttgcagatccctttagctccttgggtactttctctag 483
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 622 cataatgttgttccacctataggttgcagatccatttagctccttgggtactttctctag 681

                                                                       
Query: 484 ctcctccattgggggccctgtgatccatccaatagctgactgtgagcattcacttctgag 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctcctccattgggggccctgtgatccatccaatagctgactgtgagcattcacttctgag 741

                                                                       
Query: 544 tttgctaggccccggcattgtctcaaaagagacagctatatctgggtcctttaagtaaaa 603
           ||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||
Sbjct: 742 tttgctaggccccggcattgtctcaaaagagacaggtatatctgcgtcctttcagtaaaa 801

                                                                       
Query: 604 tcttgctagtgtatgcaatgatgtcagcgtttgaaagctgattatgggatggatccctgg 663
           ||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 802 tcttgctagtgtatgtaatgatgtctgcgtttgaaagctgattatgggaaggatccctgg 861

                                                           
Query: 664 atatggcagtctttagatggtccatcctttcgtcacagctccaaactt 711
           |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 862 atatggcagtctttagatggcccatcctttcgtcacagctccaaactt 909


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 711
Length of database: 1110
Length adjustment: 10
Effective length of query: 701
Effective length of database: 1100
Effective search space:   771100
Effective search space used:   771100
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)