NCCCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCAACTGCTGTACTTCAGTTTCCTATGGCCATAAAAAATGAGA
AACAGCCTATGGTGAGACCACAGTCAAATGAGTAAATTTTGTGTGAAAAT
CCCTTAGAATGTATAAATAATAAAATGAATGATGCATTTCAGGCCTCAAC
CAAATCTCAGAAAGTTGACTATAGGATTACAGAAAAATATATTTCTACTC
ACCAAGAGATAAAGCTTAACACCATCTAAAATAATATCACTAGATACTAT
ACATTTGCTCTGTTTTGAATTCATGTTGTCTCAACATAGGGACAATAACA
ATGTTAAATGTGTACATATGCAAAATGTGGCATTTTAAAAGCACATGTCT
TCCATGCTGTCCTGAGGAAATCTATTGTTAAAAAGTAAGGAAATGATTCG
GTTAAATTTGTCTTCTCAGTCTCCTGAAAAGTTCATGCCTTTGCCCTCCT
GTTACCACATATGATTCATCTACCTATCAACACAGGTACCATAATGAAAA
TCAGCACAGGAAGGTGGTTTAGAAGTGCAAATACAGACTAGTTTAAATGC
AAACTAGTTCTTTGGTATATGTAATTCTGCCTTATTCCTCCAGTCTTTTT
ATGTCTCCATCTCCTCGTGTAGGATTTGATCGCATGAGTAGAGTTATTGA
GAATAAGAGATTAGGTAAAGGAAACTACTAGATAAAATTTAGGTAATTAT
TTATTGN

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTGAAAATATCTCAGCTGAGGCAAAC
TAGTTTTCATGGCAAGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAACCCACCAACAACAAACTTAATTACTGAAAAAAGAAG
CTTTAAATTCAATTTTAATACTATAAAAGTATATAGTTCCCAAAAATGGG
CATAAAATTGCCATTGAAAACCACATACAAAATTCTATGGTTTCTAACAC
AAAGCCAAAAAAACAAATCAAGACTCCAATTATCAAATTTTAAACTACAT
TCCAAAGCCAAGGTAACATAAACAATTTACCAAAAAAATTAACTCTGGGG
CAAAAATAAATCTAATTATTTTACCATATTTAAGGGGGATTTAAAAAACT
GGGAGCAAACTAAACGCCATTATTCAATAATTCCCTTACAAAGGACCTAC
AAAAAAAAAAGGAAGCAAGAAAGGGAAAAAAAAAAAAAAAAGGGTGAGGA
AGGAAGATGGGGAAAAAAAAAGGGGGAANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNN
TNTNNNNTTNNNTNNNNNNNTTTTTTTTTTTTNNNNNTTNTTTTTTTNTT
TTTTTNNTTTTAATNTTTCCTTTTTTTTTTTTTNTNNTTNNTTTTTTNTT
TTTTTTTTTTTTTTTTTTTNNNTTTTTTTTTTTTTTTTTTNTNNTTTTTT
TTTTTCCTTTNA

Query= MSMg01no487_m23.b1 MSMg01no487_m23.b1 CHROMAT_FILE:
MSMg01no487_m23.b1 PHD_FILE: MSMg01no487_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:31 2005
         (631 letters)



>mm_chr5_81354318_81355348
          Length = 1031

 Score = 1197 bits (619), Expect = 0.0
 Identities = 628/631 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagtttcctatggccataaaaaatgagaaacagcctatggtgagaccacagtcaaatgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtttcctatggccataaaaaatgagaaacagcctatggtgagaccacagtcaaatgag 260

                                                                       
Query: 61  taaattttgtgtgaaaatcccttagaatgtataaataataaaatgaatgatgcatttcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaattttgtgtgaaaatcccttagaatgtataaataataaaatgaatgatgcatttcag 320

                                                                       
Query: 121 gcctcaaccaaatctcagaaagttgactataggattacagaaaaatatatttctactcac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctcaaccaaatctcagaaagttgactataggattacagaaaaatatatttctactcac 380

                                                                       
Query: 181 caagagataaagcttaacaccatctaaaataatatcactagatactatacatttgctctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagagataaagcttaacaccatctaaaataatatcactagatactatacatttgctctg 440

                                                                       
Query: 241 ttttgaattcatgttgtctcaacatagggacaataacaatgttaaatgtgtacatatgca 300
           ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttgaattaatgttgtctcaacatggggacaataacaatgttaaatgtgtacatatgca 500

                                                                       
Query: 301 aaatgtggcattttaaaagcacatgtcttccatgctgtcctgaggaaatctattgttaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatgtggcattttaaaagcacatgtcttccatgctgtcctgaggaaatctattgttaaa 560

                                                                       
Query: 361 aagtaaggaaatgattcggttaaatttgtcttctcagtctcctgaaaagttcatgccttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtaaggaaatgattcggttaaatttgtcttctcagtctcctgaaaagttcatgccttt 620

                                                                       
Query: 421 gccctcctgttaccacatatgattcatctacctatcaacacaggtaccataatgaaaatc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccctcctgttaccacatatgattcatctacctatcaacacaggtaccataatgaaaatc 680

                                                                       
Query: 481 agcacaggaaggtggtttagaagtgcaaatacagactagtttaaatgcaaactagttctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcacaggaaggtggtttagaagtgcaaatacagactagtttaaatgcaaactagttctt 740

                                                                       
Query: 541 tggtatatgtaattctgccttattcctccagtctttttatgtctccatctcctcgtgtag 600
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 741 tggtatatgtaattctgccttattcttccagtctttttatgtctccatctcctcgtgtag 800

                                          
Query: 601 gatttgatcgcatgagtagagttattgagaa 631
           |||||||||||||||||||||||||||||||
Sbjct: 801 gatttgatcgcatgagtagagttattgagaa 831


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space:   634041
Effective search space used:   634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)