NNTTTCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAGAGGC
GCGGAATCACTCCATTTCCACAGAGAGCGAGGGGGAAAATATTAATTTCT
TTAATAATATTGTATTCCCAAAGGGAAAGCATCCCAGGACAGACATCTCT
GTGGCTTTATGGAGGCTAAGCTATCCCCGCGCTGTCTTTCGCCCGCTTTT
GTCTCGGAGTTGCTTTCAGGTTCCCACCCTTGAATTACACCTTGGGCAAT
TAGATGTGTTTTACAGAGACAGAAACTGCAATTTTTAGACATTTCCGAGC
AAATGAGGAGGTTTACGGTGTATAAATATTGTCACACTTACCTCAAGACA
GATCACAGTAGCTAGCTAGCTGCTAACCAAGGTCACCCTGCCTGCTTAGC
AGAATCAGGCTTATCCTGGCGAGAGGCTCATGGCTAAGTCAACAGCTGTC
AACCAGTGGTCCTGCAGCTAAATTTTACTTGTGTGTATATATACTTTTTT
CTTTTAAATTTATTTATGTATTTATTTTAAATAAGAGAGTGTTCTGTCAG
TAGATATGCCTACATGCCAGGTGAAATCACATCCCATTACTGATGGTTGT
GAGCCACCATGTGGTTGCTGGGAATTGAATTCAGGACCTCTGGAAGAGCA
GCTGGTATTCTTAACCACGGAGCCATCTCTCCAGCCCTCCCTCTTTCTTT
CTCTCACTTTCTTTCTTTTCCTTTGGTGTTTTGGCTTTGTGGGTTAA

NCCCAATGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTACAAACGGAATTCTCAATCTTGCTCTCTCAGTCTCCAG
ATGGATGGGGGGGTAGGGTGGCCCTCCCCCCCCCCCCTTCCTCTCTCTCC
CCTCTCCTCTCCTCCCCTGCCCCCCTCTCTTATTCCCTCCCCCTTCCCCT
CCCCCTTTCTCTCCTTCCCCCTCTCCCCTCCCCCCCCCCCCCCCTTTCCG
TTCTCCCCTTCTTCCCCCCCCCCACACCCCCCCCATACTACACCCAACAC
CCAACCCATCTTTTTTTTTACCCCCTACCCCCCATCACCCCCCCCCCTTA
TATCTAACCCATCCCACAACCCCCCACCCCCACACCCCAACACTCACAAA
CCAAAATTTACCCCCCCCCCACACCCATATATTCTACTTCCACCAACCAC
CAAACATAACCACACCCAACACACCCCCCCATACCTACCCACAACCCCAT
ATTAACCCCCACCCCCCAAAATCCCACCCCCCAAAATAATACCACACAAC
ACCACCACCACAACACCTACCCCTCCCCAAAACAAACACCAACCATCCCC
CCCCCACTATCCCCCCACCCACACCCTCTCCAAATTCCACATTCCCTAAC
CCCCCCCCCCCCCCCACCCTCTTCCCTCTTCCCCTCTTTATATTCCCCAC
TATCCCATATCTCCCCCAACAATACCAAATATACCTCCCCAATAAAAACC
CCCCACATATAATAAATCCCCCCCCCCAACTAACCCATACA

Query= MSMg01no487_o09.b1 MSMg01no487_o09.b1 CHROMAT_FILE:
MSMg01no487_o09.b1 PHD_FILE: MSMg01no487_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:38 2005
         (637 letters)



>mm_chr5_134845171_134846207
          Length = 1037

 Score = 1077 bits (557), Expect = 0.0
 Identities = 600/615 (97%), Gaps = 2/615 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agggggaaaatattaatttctttaataatattgtattcccaaagggaaagcatcccagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agggggaaaatattaatttctttaataatattgtattcccaaagggaaagcatcccagga 554

                                                                       
Query: 61  cagacatctctgtggctttatggaggctaagctatccccgcgctgtctttcgcccgcttt 120
           |||||||||| |||||||||||||||||||||||||| ||||||||||||| || |||||
Sbjct: 553 cagacatctccgtggctttatggaggctaagctatcctcgcgctgtctttcacctgcttt 494

                                                                       
Query: 121 tgtctcggagttgctttcaggttcccacccttgaattacaccttgggcaattagatgtgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgtctcggagttgctttcaggttcccacccttgaattacaccttgggcaattagatgtgt 434

                                                                       
Query: 181 tttacagagacagaaactgcaatttttagacatttccgagcaaatgaggaggtttacggt 240
           ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 433 tttacagagacggaaactgcaatttttagacattttggagcaaatgaggaggtttacggt 374

                                                                       
Query: 241 gtataaatattgtcacacttacctcaagacagatcacagtagctagctagctgctaacca 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 373 gtaaaaatattgtcacacttacctcaagacagatcacagtagctagctagctgctaagca 314

                                                                       
Query: 301 aggtcaccctgcctgcttagcagaatcaggcttatcctggcgagaggctcatggctaagt 360
           ||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 313 aggtcaccctgcctgcccagcagaatcaggcttatcctggtgagaggctcatggctaagt 254

                                                                       
Query: 361 caacagctgtcaaccagtggtcctgcagctaaattttacttgtgtgtatatatacttttt 420
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||
Sbjct: 253 caacagctgtcaaccagtggtcctgcagctaaattttacttgtgtatatatat--ttttt 196

                                                                       
Query: 421 tcttttaaatttatttatgtatttattttaaataagagagtgttctgtcagtagatatgc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tcttttaaatttatttatgtatttattttaaataagagagtgttctgtcagtagatatgc 136

                                                                       
Query: 481 ctacatgccaggtgaaatcacatcccattactgatggttgtgagccaccatgtggttgct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ctacatgccaggtgaaatcacatcccattactgatggttgtgagccaccatgtggttgct 76

                                                                       
Query: 541 gggaattgaattcaggacctctggaagagcagctggtattcttaaccacggagccatctc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  gggaattgaattcaggacctctggaagagcagctggtattcttaaccacggagccatctc 16

                          
Query: 601 tccagccctccctct 615
           |||||||||||||||
Sbjct: 15  tccagccctccctct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)