Query= MSMg01no489_b01.b1 MSMg01no489_b01.b1 CHROMAT_FILE:
MSMg01no489_b01.b1 PHD_FILE: MSMg01no489_b01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:10 2005
(623 letters)
>mm_chr5_59202882_59203906
Length = 1025
Score = 1058 bits (547), Expect = 0.0
Identities = 602/621 (96%), Gaps = 2/621 (0%)
Strand = Plus / Plus
Query: 5 gaattctacagactttagagtttacaatgcctcttgacctaaatgtcacaaaatctgata 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 gaattctacagagtttagagtttacaatgcctcttgacctaaatgtcacaaaatttgata 264
Query: 65 taggaaacaaaaactattcatacataaatttacatatggatgatgtgcataagtcactgt 124
||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||
Sbjct: 265 taggaaacaaaaactattcattcataaatttacatatagatggtgtgcataagtcactgt 324
Query: 125 ttctgacgtttatttcatagtgctctataacatctttcaacactacttattgcctttttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttctgacgtttatttcatagtgctctataacatctttcaacactacttattgcctttttt 384
Query: 185 tatttccttctaattaacaaaaccttctcaatgatagaataaagctcagagtaaaaaccc 244
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 385 tatttccttctaattaacaaaaccttctcaatgatagaataaagctgagagtaaaagccc 444
Query: 245 tcctcatgtgatgatttacgcttttgaagtggtcttaaatgaaggctcaagcttttgttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcctcatgtgatgatttacgcttttgaagtggtcttaaatgaaggctcaagcttttgttt 504
Query: 305 ggactgcctctatgtctctgtttctattagtttaattgctatcactctgaattccccatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggactgcctctatgtctctgtttctattagtttaattgctatcactctgaattccccatg 564
Query: 365 ttattcccataaaaaatttgcaaaatttttatagtttaaaattctctccctatgttgctt 424
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 565 ttattcccataaaaaatttgcaaaatttttatagttttaaattctctccatatgttgctt 624
Query: 425 tctttgaccaccaatgcactccaggagttaaagaagacact--atgtgtctttttattga 482
||||| |||||||| ||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 625 cctttggccaccaattcactctaggagttaaagaagacactctatgtgtctttttattga 684
Query: 483 aaagtttgtcacctgattattccctggtatttgtgaattttgttaaaatcgttaaacttc 542
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 685 aaagtttgtcacctgactattccctggtatttgtgaattttgttaaaatcgttaaagttc 744
Query: 543 tagtctaaaagtgggatgtaagcagctctttctatgaaaccttatgtcatgagtcaaagg 602
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tagtctaaaagtgggttgtaagcagctctttctatgaaaccttatgtcatgagtcaaagg 804
Query: 603 aggtttttctaagagaaatga 623
||| |||||||||||||||||
Sbjct: 805 aggattttctaagagaaatga 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1025
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1015
Effective search space: 622195
Effective search space used: 622195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_b01.g1 MSMg01no489_b01.g1 CHROMAT_FILE:
MSMg01no489_b01.g1 PHD_FILE: MSMg01no489_b01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:10 2005
(655 letters)
>mm_chr5_59368641_59369695
Length = 1055
Score = 1228 bits (635), Expect = 0.0
Identities = 650/655 (99%)
Strand = Plus / Minus
Query: 1 tgatatatttgtgaagcttctcccagaagatatttgcctgtgattgatgagcgagtcaga 60
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 855 tgatatatttgtgaaacttctcccagaagatatttgcctgtgattgatgagcaagtcaga 796
Query: 61 atatgagaaaagaactattttgtttgtgtgtgtgtttgtttgtttttattatatggacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 atatgagaaaagaactattttgtttgtgtgtgtgtttgtttgtttttattatatggacaa 736
Query: 121 acattactttatctgtcgcaaactaaaagtgcataatggctagttaattgaattaaaata 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 735 acattactttatctgtcgcaaactaaaagtgcataatggctagttaatcgaattaaaata 676
Query: 181 tctgtcttctactcacctcagatactcatttccagaggctcagatcttcagtcttggagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tctgtcttctactcacctcagatactcatttccagaggctcagatcttcagtcttggagt 616
Query: 241 aacactgtgcatatctgatgcttaagcctttttgactacagataaattaaccattggttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aacactgtgcatatctgatgcttaagcctttttgactacagataaattaaccattggttt 556
Query: 301 tgtagttctcccacttgaagatagcagattatgttattttttatgttcaatgatcataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tgtagttctcccacttgaagatagcagattatgttattttttatgttcaatgatcataaa 496
Query: 361 acacattccaaccaagttgaactttaaaatatagagtattatgccaaacttaatcaccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acacattccaaccaagttgaactttaaaatatagagtattatgccaaacttaatcaccaa 436
Query: 421 tatcagaaatgaatatcacgttgggaaaaatacaaatgagtttccataggtcttattctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tatcagaaatgaatatcacgttgggaaaaatacaaatgagtttccataggtcttattctc 376
Query: 481 aacaccaacataaaagtgtatgtctttatcacctctaactagcgtcacatcaaacaagat 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 375 aacaccaacataaaagtgtatgtctttatcacctctaactagcatcacatcaaacaagat 316
Query: 541 aatacacacaccaagatttctatctttagaaagtcagtcgtctggtgggaaggatcctta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aatacacacaccaagatttctatctttagaaagtcagtcgtctggtgggaaggatcctta 256
Query: 601 tttaaatggtaatttaatgtctgaacttagataacttagaaatgtgatacatatg 655
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tataaatggtaatttaatgtctgaacttagataacttagaaatgtgatacatatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
