NNNCCGGTCCAAAAANNNCNCCCTCCAAACAACTCACTATTTCAANAGGA
GCCNCGNNAANCCAAGTTTTTCCGAACANGACCNNANAANGGAAAAGCAA
GCTAAACCTGGCTATATAACTTCCTCTAGTGGGTCAAAGTTGGNGGCACA
GGTTTACATGTGCCAGGACATGCTGGCCCAGTGGGGTTAATACTCTGGCC
AANCTCAGGGCAAGGTTTCCAGGGCTTGGATATGCTTCAACCCATCTGTC
AGTTATCCAANCNAANCTGCTCTAGATAAGGAACAAGACGGTTTTTNNNN
NNNNNNNNNNNNNNNNNNATGGNNNNNNNNNNNNCTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAAAAAAAATTGGTCTGGGGGGTGTGGGGTGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGCTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGT
TTGGGAGGGGGGGGCTTTTNNNNNNNNNNNNNNNNNNANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNAANNNNNNNNANNNNNN
ANANNANNNANNNNNNNNNANNNNNNNNNNNNNAANNNNNNNNNNNAANN
NAANANNNANAAAAANNNNAAAAAANNNNANANNANNNNAANANAAANNA
AAAAAAANNNNANNNNNAANNNNNNNNNNNNANNNNNNNNNNNNNNNNCC
CCNNAANNNANNAAANAANAAANNNNNAAAAAAAAAANNNNNAAAANANN
NAAAAAAAAGAAAAATATTTGTTTGTTGTG

NAAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGCAGGTTACCTGGGTGCTGGGCG
GATATCACCCAGGCTCTGGGTGTCTACAGGGGAGAGGATATAACTCATGT
CCAAAGTAAGTTATGCTAATTGGCATATCATTGATGGAGTTCATATTTGC
TACTTTCCCAGAAATAAGTGTTGATGACAGAGTTCATATGTCCTGTGATG
CTTTTCATTTCTTGAAATCATCATTGTCAATAGAATTACTCTTCTTACTG
GGCTCTTACTTGGAGGATTTCAGCGCTGATCATGTGTATTATCATTACCA
TTTACTGGAAGAACTTGCAGTCATCTTTCTCTTTCTGCCTTTTTCATTCT
TTCTTCCTTGTATTGATCGTGCTTTGCTTCACAAATAGCCTACGCTTTTT
CTTTGGCTCTCTCTAAAGCCAATCTTCCTTTGCCCCTTTAAATCATGGGA
TGGAGACTTTGCTATTTTTCCTTGATCAGTCAGAGAAAACACTTCATCAT
ACTGTGGGTCTTCAGGTTGGGGCATTTCCACAAGTATGTTCCAGGATGTC
CTCTAATGTCTCAGATGTCTGTACTATGTGTGAGAAAGGATGATCTACAA
CACCCTGCTGTATTGTTTGTCAAATGTCCTTTTATCCTTCCAGCTGTCCC
CGTCAATGGCAGTGATTTCAAACACACACTCTGGTCACATCTT

Query= MSMg01no490_j20.g1 MSMg01no490_j20.g1 CHROMAT_FILE:
MSMg01no490_j20.g1 PHD_FILE: MSMg01no490_j20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:15 2005
         (638 letters)



>mm_chr5_19917648_19918685
          Length = 1038

 Score = 1125 bits (582), Expect = 0.0
 Identities = 624/638 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   agcaggttacctgggtgctgggcggatatcacccaggctctgggtgtctacaggggagag 60
           |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||
Sbjct: 838 agcaggttacctgggtgctgggtggatgtcacccaggctctgggtgtctacagggtagag 779

                                                                       
Query: 61  gatataactcatgtccaaagtaagttatgctaattggcatatcattgatggagttcatat 120
           | |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 778 ggtataactcatgtcctaagtaagttatgctaattggcatatcattgatggagctcatat 719

                                                                       
Query: 121 ttgctactttcccagaaataagtgttgatgacagagttcatatgtcctgtgatgcttttc 180
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 718 ttgctactttcccagaaataagtgttgatgacagagttcatatgccctgtgatgcttttc 659

                                                                       
Query: 181 atttcttgaaatcatcattgtcaatagaattactcttcttactgggctcttacttggagg 240
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 atttcttgaaatcagcattgtcaatagaattactcttcttactgggctcttacttggagg 599

                                                                       
Query: 241 atttcagcgctgatcatgtgtattatcattaccatttactggaagaacttgcagtcatct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 atttcagcgctgatcatgtgtattatcattaccatttactggaagaacttgcagtcatct 539

                                                                       
Query: 301 ttctctttctgcctttttcattctttcttccttgtattgatcgtgctttgcttcacaaat 360
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttctctttctgccttttccattctttcttccttgtattgatcgtgctttgcttcacaaat 479

                                                                       
Query: 361 agcctacgctttttctttggctctctctaaagccaatcttcctttgcccctttaaatcat 420
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 agcctacactttttctttggctctctctaaagccaatcttcctttgcccctttaaatcat 419

                                                                       
Query: 421 gggatggagactttgctatttttccttgatcagtcagagaaaacacttcatcatactgtg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 418 gggatggagactttgctatttttccttgatcagtcagagaaaacacttcttcatactgtg 359

                                                                       
Query: 481 ggtcttcaggttggggcatttccacaagtatgttccaggatgtcctctaatgtctcagat 540
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggtcttcaggttggggcacttccacaagtatgttccaggatgtcctctaatgtctcagat 299

                                                                       
Query: 541 gtctgtactatgtgtgagaaaggatgatctacaacaccctgctgtattgtttgtcaaatg 600
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtctatactatgtgtgagaaaggatgatctacaacaccctgctgtattgtttgtcaaatg 239

                                                 
Query: 601 tccttttatccttccagctgtccccgtcaatggcagtg 638
           ||||||||||||||||||||||||||||| ||||||||
Sbjct: 238 tccttttatccttccagctgtccccgtcagtggcagtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)