Query= MSMg01no491_e05.b1 MSMg01no491_e05.b1 CHROMAT_FILE:
MSMg01no491_e05.b1 PHD_FILE: MSMg01no491_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:07 2005
(623 letters)
>mm_chr5_93103157_93104179
Length = 1023
Score = 1143 bits (591), Expect = 0.0
Identities = 615/623 (98%)
Strand = Plus / Minus
Query: 1 gctccctgctcacttttgttcccgcctggctcctgggaatctctggaagagatgggaaac 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 685 gctccctgctcacttttgttccggcctggctcctgggaatctctggaagagatgggaaac 626
Query: 61 tgtggggacagacagtggagtctcgggctgtcaccagtatttcgtcccacatgagactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgtggggacagacagtggagtctcgggctgtcaccagtatttcgtcccacatgagactgt 566
Query: 121 gtgactgtagcctcttgataatccacttcaggtcctagactttccacctcagcaacagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgactgtagcctcttgataatccacttcaggtcctagactttccacctcagcaacagcc 506
Query: 181 tcctttcccacaacacttgcagaagtccccaattgagctgtcctaggcattgctcctgtt 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 505 tcctttcccacaacacttgcagaagtccccaattgagcggtcctaggcattgctcctgtt 446
Query: 241 aaatgtcatgtttgttttaaggtcatgggaatgcagaaaacaagtaagtggtgtgggctg 300
|||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 445 aaatgtcaggttggctttaaggtcacgggaatgcagaaaacaagtaagtggtgtgggctg 386
Query: 301 ttcctcggtgtgttttggctgataactacataagaaaaaaaagtccagagtgttgaatct 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 ttcctcggtgtgttttggctgataactacataagaaaaaaaggtccagagtgttgaatct 326
Query: 361 tcccagagggtgagttagacagggctgctaatgtgtgtatacctatggtctatgggagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcccagagggtgagttagacagggctgctaatgtgtgtatacctatggtctatgggagtg 266
Query: 421 ggaaagttgaggcagagatctgaaatgccaacctctgtgccacgtttttcatttttttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaaagttgaggcagagatctgaaatgccaacctctgtgccacgtttttcatttttttaa 206
Query: 481 agatgtatttttattttatgttaatttagtgttttgcctgcctgtgtgtaagggcaccat 540
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 agatgtatttttattttatgttaatttagtattttgcctgcctgtgtgtaagggcaccat 146
Query: 541 gtgggtgcctgatgcctgtggtggctagaaggggttgtgggattccctggaactggactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gtgggtgcctgatgcctgtggtggctagaaggggttgtgggattccctggaactggactt 86
Query: 601 acagaaggttttgagcagccatg 623
|||||||||||||||||||||||
Sbjct: 85 acagaaggttttgagcagccatg 63
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_e05.g1 MSMg01no491_e05.g1 CHROMAT_FILE:
MSMg01no491_e05.g1 PHD_FILE: MSMg01no491_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:07 2005
(638 letters)
>mm_chr5_92896127_92897164
Length = 1038
Score = 1025 bits (530), Expect = 0.0
Identities = 610/645 (94%), Gaps = 21/645 (3%)
Strand = Plus / Plus
Query: 1 gcctgggctgcagggcgagactgtctctaaagtaaacaaaagaaggaaatgtttgagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctgggctgcagggcgagactgtctctaaagtaaacaaaagaaggaaatgtttgagtta 260
Query: 61 ttccctgtgaactactgaatcccataggaaggagggacacacagaatgaaaaagaacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccctgtgaactactgaatcccataggaaggagggacacacagaatgaaaaagaacaat 320
Query: 121 tttaattcactggccacatcaacagctgtgcttccagcttttttggtatgctggataaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaattcactggccacatcaacagctgtgcttccagcttttttggtatgctggataaat 380
Query: 181 tggttcgtacaatgtgttagttgatggggacacctctcagtgctgtaagtgcactttccc 240
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tggttcgtacaatgtgttaggtgatggggacacctctcagtgctgtaagagcactttccc 440
Query: 241 agcgtgtactgggctcaatcttcaacaccaaaaggaaagcaagcaagcaacaccccgacc 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 agcgtgcactgggctcaatcttcaacaccaaaaggaaagcaagcaagcaacacctcgacc 500
Query: 301 tttagtcattacgttcatctcaaaaggagttagtcatttgggttcacccatagctctcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttagtcattacgttcatctcaaaaggagttagtcatttgggttcacccatagctctcta 560
Query: 361 tggaaaatcacctattgccaggcggtggtggcgcaca--cctttaatcccagcatttagg 418
||||||||||||||| |||||||||||||||| ||| ||||||||||||||| || ||
Sbjct: 561 tggaaaatcacctatcgccaggcggtggtggc--acatgcctttaatcccagcacttggg 618
Query: 419 aggcagaggcaggctgattactgagttcgaggccagcctggtatacagagt-acgttcca 477
|||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||
Sbjct: 619 aggcagaggcaggctgattactgagttcgaggccagcctggtctacagagtga-gttcca 677
Query: 478 ggacagccagggttaca--gagaaaccctgtctggaaaacaaaacaaaacaagcccccac 535
||||||||| ||||||| |||||||||||||||||||||||||||||| | |||| |
Sbjct: 678 ggacagccaaggttacacagagaaaccctgtctggaaaacaaaacaaaata---cccctc 734
Query: 536 cccaccccaccccaaaa--tcacctatcacgttggtggctgatatcagtgacctcagatc 593
|||| | |||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 735 ccca----a----aaaaaatcacctatcaccttggtggctgatatcagtgacctcagatc 786
Query: 594 actagataggggtgtacggtgagatctgactcangttttttgctc 638
||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 787 actagataggggtgtacagtgagatctgactcaggttttttgctc 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
