MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-491H14
Chromosome	5 (Build37)
Map Location	28,616,144 - 28,616,820
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Dpp6, Speer4b, Paxip1, Htr5a, EG433862, LOC231069, Insig1, En2, Cnpy1
Downstream gene	Prr8, Shh, LOC100039258, Rnf32, EG664949, Lmbr1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dpp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13483 MGI:94921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Speer4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73526 MGI:1920776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Paxip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55982 MGI:1890430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htr5a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15563 MGI:96283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433862 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433862 MGI:3642937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 19 Proteins

name	LOC231069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:231069
definition	note : microfibrillar-associated protein 1 pseudogene pseudo : _no_value

name	Insig1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231070 MGI:1916289
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	En2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13799 MGI:95390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnpy1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269637 MGI:2442451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prr8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381626 MGI:1919670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 149 ESTs, 2 Proteins

name	Shh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20423 MGI:98297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039258 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 55 mRNAs, 2374 ESTs, 22 Proteins

name	Rnf32 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56874 MGI:1861747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664949 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664949 MGI:3647909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs pseudo : _no_value

name	Lmbr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56873 MGI:1861746
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dpp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24429567 GeneID:13483 MGI:94921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dipeptidylpeptidase 6 transcript_id : NM_010075.1

name	Speer4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21735468 GeneID:73526 MGI:1920776
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated glutamate (E)-rich protein 4b transcript_id : NM_028561.1

name	Paxip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734450 GeneID:55982 MGI:1890430
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PAX interacting (with transcription-activation domain) protein 1 transcript_id : NM_018878.2

name	Htr5a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370344 GeneID:15563 MGI:96283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 5A transcript_id : NM_008314.2

name	EG433862 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374625 GeneID:433862 MGI:3642937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 19 Proteins product : predicted gene, EG433862 transcript_id : XM_485584.3

name	Insig1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378164 GeneID:231070 MGI:1916289
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin induced gene 1 transcript_id : NM_153526.3

name	En2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385154 GeneID:13799 MGI:95390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : engrailed 2 transcript_id : NM_010134.3

name	Cnpy1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369857 GeneID:269637 MGI:2442451
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : canopy 1 homolog (zebrafish) transcript_id : NM_175651.3

name	Prr8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374627 GeneID:381626 MGI:1919670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 149 ESTs, 2 Proteins product : proline rich 8, transcript variant 1 transcript_id : XM_355585.5

name	Shh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254618 GeneID:20423 MGI:98297
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sonic hedgehog transcript_id : NM_009170.2

name	LOC100039258 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253820 GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 mRNAs, 1189 ESTs, 22 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001472557.1

name	LOC100039258 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253818 GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 55 mRNAs, 2372 ESTs, 22 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001472531.1

name	LOC100039258 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253822 GeneID:100039258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 288 ESTs, 2 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 3 transcript_id : XM_001472580.1

name	Rnf32 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354274 GeneID:56874 MGI:1861747
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 32 transcript_id : NM_021470.4

name	Lmbr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126507092 GeneID:56873 MGI:1861746
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : limb region 1 transcript_id : NM_020295.3

name	Dpp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24429568 CCDS:CCDS19139.1 GeneID:13483 MGI:94921
definition	codon_start : 1 note : inversion, Chr 5, Harwell 6, proximal product : dipeptidylpeptidase 6 protein_id : NP_034205.1

name	Speer4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21735469 CCDS:CCDS19140.1 GeneID:73526 MGI:1920776
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : sperm-associated glutamate (E)-rich protein 4b; spermatogenic-associated glutamate (E)-rich protein 4b product : spermatogenesis associated glutamate (E)-rich protein 4b protein_id : NP_082837.1

name	Paxip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42734451 GeneID:55982 MGI:1890430
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 product : Pax transcription activation domain interacting protein protein_id : NP_061366.2

name	Htr5a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370345 CCDS:CCDS19141.1 GeneID:15563 MGI:96283
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : 5-hydroxytryptamine receptor 5A protein_id : NP_032340.2

name	EG433862 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374626 GeneID:433862 MGI:3642937
definition	codon_start : 1 product : hypothetical protein protein_id : XP_485584.3

name	Insig1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23943846 CCDS:CCDS19142.1 GeneID:231070 MGI:1916289
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006991 - response to sterol depletion [Evidence IDA] codon_start : 1 note : INSIG-1 membrane protein product : insulin induced gene 1 protein_id : NP_705746.1

name	En2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753752 CCDS:CCDS19143.1 GeneID:13799 MGI:95390
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030902 - hindbrain development [Evidence IGI]; GO:0030901 - midbrain development [Evidence IGI]; GO:0048666 - neuron development [Evidence IGI]; GO:0030182 - neuron differentiation [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : engrailed 2 protein_id : NP_034264.1

name	Cnpy1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28316752 CCDS:CCDS19144.1 GeneID:269637 MGI:2442451
definition	codon_start : 1 product : canopy 1 homolog protein_id : NP_783582.1

name	Prr8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374628 GeneID:381626 MGI:1919670
definition	codon_start : 1 product : proline rich 8 isoform 1 protein_id : XP_355585.5

name	Shh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21617861 CCDS:CCDS19146.1 GeneID:20423 MGI:98297
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0043237 - laminin-1 binding [Evidence IDA]; GO:0005113 - patched binding [Evidence IPI]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008209 - androgen metabolism [Evidence IMP]; GO:0001525 - angiogenesis [Evidence IDA]; GO:0007411 - axon guidance [Evidence IDA] [Evidence IMP]; GO:0048754 - branching morphogenesis of a tube [Evidence IMP]; GO:0007154 - cell communication [Evidence IEA]; GO:0048468 - cell development [Evidence IMP]; GO:0001708 - cell fate specification [Evidence IGI] [Evidence IMP]; GO:0007267 - cell-cell signaling [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0009953 - dorsal/ventral pattern formation [Evidence IGI]; GO:0009790 - embryonic development [Evidence IGI]; GO:0042733 - embryonic digit morphogenesis [Evidence IGI]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0048598 - embryonic morphogenesis [Evidence IMP]; GO:0001747 - eye development (sensu Mammalia) [Evidence IDA] [Evidence IMP]; GO:0030900 - forebrain development [Evidence IGI]; GO:0007507 - heart development [Evidence IMP]; GO:0030902 - hindbrain development [Evidence IMP] [Evidence IGI]; GO:0016539 - intein-mediated protein splicing [Evidence IEA]; GO:0030324 - lung development [Evidence IMP] [Evidence IGI]; GO:0030539 - male genitalia development [Evidence IMP]; GO:0001656 - metanephros development [Evidence IMP]; GO:0030901 - midbrain development [Evidence IGI]; GO:0045596 - negative regulation of cell differentiation [Evidence IMP] [Evidence IDA]; GO:0030336 - negative regulation of cell migration [Evidence IDA]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0007405 - neuroblast proliferation [Evidence IDA]; GO:0048663 - neuron fate commitment [Evidence IMP]; GO:0014003 - oligodendrocyte development [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] [Evidence IGI]; GO:0030850 - prostate gland development [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IDA]; GO:0030162 - regulation of proteolysis [Evidence IDA]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence TAS]; GO:0007224 - smoothened signaling pathway [Evidence IGI] [Evidence IDA]; GO:0051146 - striated muscle cell differentiation [Evidence IMP] [Evidence IDA]; GO:0001658 - ureteric bud branching [Evidence IMP]; GO:0001570 - vasculogenesis [Evidence IDA] codon_start : 1 note : short digits product : sonic hedgehog protein_id : NP_033196.1

name	LOC100039258 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253819 GeneID:100039258
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001472581.1

name	LOC100039258 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253821 GeneID:100039258
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001472607.1

name	LOC100039258 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253823 GeneID:100039258
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 3 protein_id : XP_001472630.1

name	Rnf32 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981166 GeneID:56874 MGI:1861747
definition	GO_component : GO:0016235 - aggresome [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : limb region 2 product : ring finger protein 32 protein_id : NP_067445.2

name	Lmbr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45598379 CCDS:CCDS19148.1 GeneID:56873 MGI:1861746
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0042733 - embryonic digit morphogenesis [Evidence IMP]; GO:0035115 - embryonic forelimb morphogenesis [Evidence ISS]; GO:0035116 - embryonic hindlimb morphogenesis [Evidence ISS] codon_start : 1 product : limb region 1 protein_id : NP_064691.2

name	EG664949 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94374634 GeneID:664949 MGI:3647909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs product : predicted gene, EG664949 pseudo : _no_value transcript_id : XR_001686.1

clone name	MSMg01-436E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-344N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233I13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-270D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274L14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-491H14.T7 (MSMg01no491_h14.b1)	MSMg01-491H14.TJ (MSMg01no491_h14.g1)
ACC	AG569460	AG569461
length	750	1,679
length of high quality (start - end)	685 (58 - 742)	---
definition	CHROMAT_FILE: MSMg01no491_h14.b1 PHD_FILE: MSMg01no491_h14.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:15:24 2005	CHROMAT_FILE: MSMg01no491_h14.g1 PHD_FILE: MSMg01no491_h14.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:15:24 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXTTCCTAAATCCGCGGAATTCCAAGGCTG TTCCCACCACTCAGTGCTGAACAGTTACGAGCTGAGCTCTTCCAGAGGTC CTGAGTTAAATTCCCACAGCCATCTGTAATGGGATCTGAGGGCCTCCTCC AGTGTGTCTAAAGACAGCTACAGTGCATAAAATAAATAAATAACATAAAA TAAATAAATAGTACTCACATTCATTCAATCAATCAATCAATCAATAAATA AATAAATAAATAAATAAACAAAACAAATGACAGAGAAACACTGAAATGGT CCATGTCTATTGCTAATACAGTTGAGATTCTCCCTTGAGGATCACCGCCC AGTCTTCGGTATGTCTCACTCTCTCCGAGTCTCCCTTGAGAAGCTCATAC CCACACCTGGATATGTATATGTCTTATTCTTTTCTTAACTTTTGTGCATA AAATCTCTTCTTTAGAGCAGGAGAGATAGCTCAGCATTTAAGAGCATTAT CTGCTCTTCTGGGGGGTCCTGAGTTCAATTCCCAGCAACCATACGGTGGC TCGCAACCATCTGTAACGGGATCCGAAGCTCTCTTCTGGTGTGTCTGAAG ACGGCTACAGTGTACTCATATGGATACAATAAAAATCAGTCTTGAAGAAG CCCTTTGCTGACTAGCTCCTTCAGCCATGTTCCCCTTCAGCACTTTTTTG CTTTTATTAAAACCCCTACCTCTGCTCCCCACACGCTAGTCTTAAAATCN	ACAGGTTNTAGNACGCAACNAACGAGCTGGCATGTGACAATCTCTCTCTT CTTCCTCGCCTCGCATCACGCGCGTCTTTCTTTCTACAGTTTNCCNCAAG AACTCATCCTCCACGTCAAGCCGGACGCGGANACATAACCAGTCTTAGAG TGTGTGAGCGATGTACTGCGTGGGGTCGGTCGGGACGAGGTTGTGGGATA TGAGTGTGAGGGAGCTTGGGCAGGCGCAGTGTGAGTGGTGCGTTCCGTGG CGTGGCNCTGATGTGTAGTTTACCGTGCGTGCGCACCGCGTTCTGTGTTC GCGAGCACTGATACGAGTATGATCGCTCGATGCTGTATGGTCATACAGCA GACCGTGGACTGCTGTACGGGGCGAGATGCACGCTGCGGTCATCAGGCAC TGATGTCTCGACTGCCTAGTCCTCGTCGGTTCATTGCCCCGTCGCCATTG TCGGTATGCGAATTGTGGNTTCCTGATGTAATGTGGGTGGTNTGTGGCGC TGTCCTGGATTGACTGTCTTATTCTGCTATCTAACATTGTTGTCTGACCA GTGGTCAGACGCTACTAGATCGCGACACAGCTCACCCGTAGTCTGTATCA CCTTGGTGATGAGTGGACGGATGGACGCGGAAACAACTGTATGTATAACG AGTATGATTATAATAAGATACTTAAATATATTTGTTATAGTCAATTGATT CGTGTTAATAAGATTATNTATCTGTCACCCACTACATGATAGAGACACAG TATCATTAATCTAGCTCATGCGACATGTACTCGAGAATATTGTATGTGAT GCTGTATGCGTGTCGCGTCGTGCACGACGGCTCGCACGTCCGTAGTGTGT ATATACTGCTCCGCACGAATCGACGTCACGCGANTANGCGCCGTGTGACG CTCTGATGTGAGACGGAGTGTATATTATCACTATCACGTGTACTGTGCGA ATCCTCTCAGTGCGGTCCAGATACGTCACGGCTATCGATCCGAGACGAAC ACTGAAGACGTACGTCCGCCTCACCGCGCCGACGTGCTCGGAGCGATACA GAATGTGCGATGTACCGTATGTCAGACGCGTCGTGTCNTCCTCGCTCCGC GTGTGCAGTGCTCTTGCTCGTTGCTCGATGTAGCGTGAGCGCACCCGAGT ACGCACGTCTTCTCTAGTCTGCAGCGCGTGAGATGTGCTTGCTCGTCGTG TCGTCAGATGAGGCGTCATAGATTATGCTCGANGTGTACGCANTATGTAN TATACCCCTACACGCGTGCGTCAGATCGCATCTCGTGACATATGATAGTA TCATAAGANGCGTACGTGCGCACGTCGCTAGTGTTACATATGTGTATAGN GTCTATTACGTGATATGCGCTACGCAGTGAGGAGCTCAGTGATACGACTC GTGGCGACTCACATCTTCAGCGCTGATCTACACGCCTGCTATCCACGACA CACATGATGTGACGCGCTCTCNTTGATTACANCGCATGTCGCGCGTACAG CGTCGCTATCACGCGCGTCGTAGCTCTATACCATACTATGCATGTGACGT CGCCAAGTGTACGTGCGGACTGATTGCGTTCGCATNCTGCTCTCTGTTGG ATGACGCTCCANTCGCTGTGAGTGGTGGNTCCATNTANGAGTGGTGCGCG GAGAGATGATAGAGNGCCTCAGTATGCTG
quality values	Open. Hide. 8 8 8 13 13 10 9 8 10 21 21 37 27 20 24 22 23 19 25 9 9 7 7 7 7 6 6 8 7 8 10 11 18 15 21 18 26 26 31 31 35 29 26 26 26 28 33 28 11 15 12 11 11 10 11 16 13 27 22 28 28 21 29 29 33 48 57 57 57 38 38 42 42 37 47 53 57 57 57 57 57 57 53 68 68 68 68 68 68 68 51 51 48 48 48 50 59 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 46 50 50 50 57 68 68 68 59 59 59 59 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 48 57 57 50 57 57 50 50 53 57 57 57 57 57 57 53 53 53 53 50 50 59 59 47 34 34 10 11 7 7 8 15 23 43 59 59 59 50 50 53 53 57 57 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 68 59 57 57 57 54 57 57 68 68 68 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 57 57 57 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 59 59 59 59 59 59 59 59 54 54 54 59 59 59 59 59 57 57 44 48 48 57 57 57 57 57 48 57 57 57 57 57 57 57 57 59 59 59 57 57 54 59 59 68 59 59 57 57 57 57 48 48 48 59 59 54 54 54 54 54 54 43 43 36 39 39 42 40 48 43 43 33 39 39 48 48 48 48 48 47 47 43 43 39 39 39 41 41 41 39 36 25 34 23 23 20 32 34 34 34 25 25 25 34 28 37 37 37 37 35 35 35 39 59 59 47 41 34 34 28 24 24 34 34 47 41 41 41 37 37 31 30 34 28 27 27 34 34 28 30 24 25 30 24 26 30 34 31 40 37 37 34 34 25 21 21 26 26 36 34 32 31 31 29 33 28 28 24 24 28 28 28 24 25 32 32 44 41 31 26 28 20 20 28 32 34 32 37 43 59 37 37 30 30 25 30 30 34 28 19 19 24 22 29 22 25 25 31 27 23 19 18 19 25 37 37 37 37 32 29 29 35 29 32 32 32 39 39 39 39 30 26 17 17 17 9 9 9 9 7 8 3 0	Open. Hide. 6 6 6 6 6 6 3 0 3 8 3 0 3 6 6 6 8 10 3 0 3 9 9 11 10 10 10 10 10 11 11 9 8 8 6 6 6 6 6 6 6 6 8 8 6 6 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 11 11 8 8 8 8 8 12 12 10 8 8 6 6 6 8 10 10 8 8 8 10 10 8 8 8 8 8 10 8 3 0 3 3 0 3 8 8 6 6 6 6 6 6 8 8 10 9 10 11 8 10 6 6 6 7 7 7 7 6 6 6 8 6 6 6 6 8 8 3 0 3 10 10 10 10 9 9 9 9 9 8 8 8 8 6 6 6 6 8 6 6 8 6 6 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 10 8 8 8 8 8 8 10 9 8 6 6 7 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 8 8 8 6 6 6 6 6 8 6 6 8 8 9 12 12 13 8 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 3 0 3 6 6 6 7 6 8 8 8 8 9 6 6 6 6 6 6 6 8 8 10 11 12 8 8 8 8 8 8 8 10 13 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 10 13 6 6 6 6 8 6 6 8 8 11 11 9 8 8 8 6 8 8 8 8 8 8 8 8 8 6 6 6 6 8 11 12 8 8 8 6 6 6 6 6 6 8 8 8 8 8 8 6 8 6 6 8 8 10 6 6 6 10 10 8 8 8 8 8 8 8 8 12 8 8 6 6 8 8 8 8 9 6 8 6 6 8 8 8 8 7 8 8 8 6 6 6 6 8 8 8 8 10 10 8 10 10 9 8 8 6 6 6 6 8 8 11 9 8 8 8 8 8 8 8 8 8 12 12 19 16 17 10 3 0 3 8 8 6 6 6 6 6 6 10 10 9 9 9 9 6 7 9 7 6 8 3 0 3 9 8 8 8 8 8 8 6 6 8 8 11 8 8 6 6 8 8 8 8 8 10 13 10 8 9 9 8 8 8 10 10 8 8 8 8 11 14 17 15 15 15 10 8 8 8 8 10 8 8 6 6 6 6 8 7 8 8 10 8 8 8 8 8 8 6 6 6 6 6 6 6 6 6 8 8 8 8 13 12 15 11 11 6 6 6 10 8 9 8 10 8 8 8 8 8 8 8 8 7 7 9 12 8 10 8 8 8 8 10 9 10 8 10 6 6 6 6 8 8 8 8 8 10 6 6 6 6 8 8 10 14 10 9 8 8 12 8 9 8 8 8 6 9 7 8 8 8 8 9 9 10 10 10 8 8 8 6 8 6 6 8 6 8 8 8 11 10 10 8 7 7 6 6 8 6 6 8 8 8 8 8 6 7 7 7 7 7 8 10 8 9 7 8 10 8 8 8 10 10 19 10 10 6 6 8 6 6 6 7 10 8 8 8 10 10 8 8 8 8 10 6 6 3 0 3 6 6 6 11 12 8 6 6 6 6 6 6 6 6 6 6 6 8 8 8 8 8 6 6 6 8 10 9 9 8 8 8 8 6 6 6 6 8 8 10 9 9 11 10 9 9 9 9 9 7 7 7 6 6 6 6 6 8 8 12 12 10 10 8 8 8 8 8 8 8 8 10 11 10 10 10 10 10 10 10 11 9 8 8 8 8 8 9 13 15 11 10 9 9 9 9 10 10 8 8 8 8 10 9 9 8 8 10 8 9 8 8 8 8 9 9 10 11 9 8 8 8 8 8 8 10 11 11 11 8 10 10 8 9 6 8 8 8 8 11 8 6 6 6 6 6 8 8 8 10 10 8 10 9 8 8 8 8 8 8 6 6 7 3 0 3 3 0 3 6 6 6 6 6 6 8 8 8 8 10 8 8 8 8 8 6 6 8 8 8 6 6 6 6 6 6 8 8 8 8 8 8 8 8 10 10 10 10 10 10 16 11 11 10 9 9 9 9 9 10 10 10 8 8 8 10 10 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 9 9 9 8 8 9 9 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 9 9 9 10 22 15 13 13 10 11 17 16 13 11 11 8 6 6 6 8 6 8 8 8 10 10 10 8 8 8 8 10 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 7 6 6 6 6 6 6 8 10 19 17 14 10 8 8 9 9 12 7 7 6 6 8 10 8 8 6 6 10 8 8 10 6 6 8 8 8 8 6 7 9 8 8 8 8 8 8 3 0 3 6 6 8 6 7 10 6 6 10 6 6 8 6 8 7 6 6 6 8 8 8 9 9 9 9 10 10 8 8 8 8 8 8 8 10 8 6 6 6 6 8 8 8 8 6 8 6 6 8 6 6 6 6 7 10 12 8 8 8 8 8 8 8 6 6 6 6 6 6 6 6 6 6 6 10 8 8 6 6 6 8 6 8 8 8 8 8 6 7 8 6 8 8 8 8 6 8 8 6 6 6 6 6 8 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 9 9 8 8 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 3 0 3 10 9 8 8 8 8 8 3 0 3 8 8 8 8 3 0 3 8 8 6 7 6 6 8 8 8 8 8 8 10 13 10 10 11 12 18 13 10 10 10 10 17 11 9 8 8 8 8 8 10 10 11 11 11 11 12 19 8 8 6 6 6 7 8 6 6 8 8 9 9 9 9 9 3 0 3 9 9 8 8 8 6 10 7 6 6 8 18 11 8 8 6 6 8 6 8 8 8 9 9 8 8 8 8 8 10 8 10 8 8 8 8 8 9 3 0 3 7 8 7 6 6 6 6 6 6 8 7 7 7 8 8 8 8 8 8 6 6 6 6 8 6 6 6 6 8 6 8 8 8 8 8 8 8 8 8 9 15 8 8 8 13 13 10 10 9 8 10 8 6 6 6 6 6 8 8 8 8 6 8 6 6 8 6 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 7 10 7 7 8 7 8 8 8 6 6 6 8 10 16 15 8 6 6 6 6 8 8 12 10 10 9 9 10 10 12 12 9 9 10 3 0 3 6 6 6 6 6 6 6 3 0 3 8 8 8 8 10 9 10 8 10 8 8 8 8 8 8 6 6 6 8 10 8 8 8 8 6 6 6 6 6 6 6 6 6 8 6 9 9 8 6 6 6 8 8 9 10 9 8 7 6 6 8 8 8 8 8 8 6 6 6 6 8 8 9 8 8 6 6 8 8 8 8 6 8 6 6 8 6 6 6 6 8 6 9 8 8 8 8 8 8 8 8 8 8 9 10 7 7 6 6 6 6 3 0 3 6 6 6 6 9 6 6 6 6 8 6 8 7 9 10 11 8 8 8 8 8 8 8 3 0 3 6 6 6 11 8 8 8 8 8 8 8 8 8 8 3 0 3 8 6 6 3 0 3 3 0 3 10 8 8 12 8 8 8 8 6 6 6 7 6 8 8 8 8 9 10 10 10 8 6 8 3 0 3 8 6 6 6 6 8 6 10 9 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no491_h14.b1 MSMg01no491_h14.b1 CHROMAT_FILE:
MSMg01no491_h14.b1 PHD_FILE: MSMg01no491_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:24 2005
         (685 letters)



>mm_chr5_28615936_28617020
          Length = 1085

 Score = 1205 bits (623), Expect = 0.0
 Identities = 666/685 (97%), Gaps = 8/685 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cactcagtgctgaacagttacgagctgagctcttccagaggtcctgagttaaattcccac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cactcagtgctgaacagttacgagctgagctcttccagaggtcctgagttaaattcccac 268

                                                                       
Query: 61  agccatctgtaatgggatctgagggcctcctccagtgtgtctaaagacagctacagtgca 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 269 agccatctgtaatgggatctgagggcctcctccagtgtgtctaaagacagctgcactgca 328

                                                                       
Query: 121 taaaataaataaataacataaaataaataaatagtactcacattcattcaatcaatcaat 180
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 329 taaaataaataaataacataaaataaataagtagtactcacattcattcaatcaatcaat 388

                                                                       
Query: 181 caatcaataaataaataaataaataaataaacaaaacaaatgacagagaaacactgaaat 240
           |||||        ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 caatc--------aatcaataaataaataaacaaaacaaatgacagagaaacactgaaat 440

                                                                       
Query: 241 ggtccatgtctattgctaatacagttgagattctcccttgaggatcaccgcccagtcttc 300
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtccatgtctattgctaagacagttgagattctcccttgaggatcaccgcccagtcttc 500

                                                                       
Query: 301 ggtatgtctcactctctccgagtctcccttgagaagctcatacccacacctggatatgta 360
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtatgtctcactctcttcgagtctcccttgagaagctcatacccacacctggatatgta 560

                                                                       
Query: 361 tatgtcttattcttttcttaacttttgtgcataaaatctcttctttagagcaggagagat 420
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgttttattcttttcttaacttttgtgcataaaatctcttctttagagcaggagagat 620

                                                                       
Query: 421 agctcagcatttaagagcattatctgctcttctggggggtcctgagttcaattcccagca 480
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgctcagcatttaagagcattatctgctcttctggggggtcctgagttcaattcccagca 680

                                                                       
Query: 481 accatacggtggctcgcaaccatctgtaacgggatccgaagctctcttctggtgtgtctg 540
           ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 681 accatacggtggctcgcaaccatctgtaatgggatctgaagctctcttctggtgtgtctg 740

                                                                       
Query: 541 aagacggctacagtgtactcatatggatacaataaaaatcagtcttgaagaagccctttg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagacggctacagtgtactcatatggatacaataaaaatcagtcttgaagaagccctttg 800

                                                                       
Query: 601 ctgactagctccttcagccatgttccccttcagcacttttttgcttttattaaaacccct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgactagctccttcagccatgttccccttcagcacttttttgcttttattaaaacccct 860

                                    
Query: 661 acctctgctccccacacgctagtct 685
           ||||||||||||||||| |||||||
Sbjct: 861 acctctgctccccacacactagtct 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information