Query= MSMg01no492_p20.b1 MSMg01no492_p20.b1 CHROMAT_FILE:
MSMg01no492_p20.b1 PHD_FILE: MSMg01no492_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:22 2005
(614 letters)
>mm_chr5_74777059_74778072
Length = 1014
Score = 654 bits (338), Expect = 0.0
Identities = 347/350 (99%)
Strand = Plus / Minus
Query: 265 ctcacaggaagtttcctgttcctccagcatacagatttattaatattaagaattaacaat 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 ctcacaggaagtttcctgttcctccagcatacagatttattaatattaagaattaacaat 955
Query: 325 gctcctgcatagttataactagctgtcttcctgctatgatatgtgaaagagcatgctttc 384
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 954 gctcctgcatagttataactggctgtcttcctgctatgatatgtgaaagagcatgctttc 895
Query: 385 cttaagcctcaccaatataccatactgttaagcttccaaagttttgtcaatctttggggt 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 cttaagcctcaccaatataccatactgttaagcttccaaagttttgtcaatctttggggt 835
Query: 445 gataaatgcaattttggtatcagatatcatttcaattttatactttttcttttaagtagg 504
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 834 gataaatgcaattttggtatcagatatcatttcaattttatactttttcttttatgtagg 775
Query: 505 tgaagttgaaggtattttcacatttcaatttaacttatcttattgtctatgattgcttgc 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 tgaagttgaaggtattttcacatttcaatttaacttatcttattgtctatgattgcttgc 715
Query: 565 tttttgcttccccttttaaaaatatactattttattgtccttttaatcaa 614
||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tttttgctttcccttttaaaaatatactattttattgtccttttaatcaa 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_p20.g1 MSMg01no492_p20.g1 CHROMAT_FILE:
MSMg01no492_p20.g1 PHD_FILE: MSMg01no492_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:22 2005
(508 letters)
>mm_chr5_74640544_74641450
Length = 907
Score = 913 bits (472), Expect = 0.0
Identities = 499/508 (98%), Gaps = 1/508 (0%)
Strand = Plus / Plus
Query: 1 ggtcacatgtgtcacctgtcacgctggcgccacgacaaagccagatctctttcatgtcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtcacatgtgtcacctgtcacgctggcgccacgacaaagccagatctctttcatgtcat 260
Query: 61 gttgacctggcccctttcccagtcacaaacctttctgtaagcaggaaaatgcttgcacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgacctggcccctttcccagtcacaaacctttctgtaagcaggaaaatgcttgcacaa 320
Query: 121 tattttatgcttactggctttgacatcgccacaggcagctggcacacaggcccctacaca 180
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtccatgcttactggctttgacatcgccacaggcagctggcacacaggcccctacaca 380
Query: 181 gccaaggattcaaaggagcagatctcacagtgagctgccctaagtggtggcttgttctta 240
||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 381 gccaaggattcaaaggagcagatctcatagtgagctgccctaagtagtggcttgttttta 440
Query: 241 tgtcagtgagctaattctattgaattacaaatttgcggttcacactctttaatatatccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtcagtgagctaattctattgaattacaaatttgcggttcacactctttaatatatccc 500
Query: 301 ctttcaacctgagtggacattttttggcgcctctgaagagcatcttgtggtttgctgtct 360
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttcaacctgagtggacatattt-ggcgcctctgaagagcatcttgtggtttgctgtct 559
Query: 361 ctcagcgctgactttgggagggtctctgcatctgtcaggtgcagggaactgggtgaggcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctcagcgctgactttgggagggtctctgcatctgtcaggtgcagggaactgggtgaggcc 619
Query: 421 agaccttctccatgcagggtgacaattctgttggttttactttctgcaccacataaggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agaccttctccatgcagggtgacaattctgttggttttactttctgcaccacataaggag 679
Query: 481 ctactatgcaaaggactcaccataccac 508
||||||||||||||||||||||||||||
Sbjct: 680 ctactatgcaaaggactcaccataccac 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 907
Length adjustment: 10
Effective length of query: 498
Effective length of database: 897
Effective search space: 446706
Effective search space used: 446706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|