Query= MSMg01no493_p09.b1 MSMg01no493_p09.b1 CHROMAT_FILE:
MSMg01no493_p09.b1 PHD_FILE: MSMg01no493_p09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:41 2005
(673 letters)
>mm_chr5_58473216_58474288
Length = 1073
Score = 1263 bits (653), Expect = 0.0
Identities = 668/673 (99%)
Strand = Plus / Minus
Query: 1 ggaaggcgagcaagaatgtcatgcaaagtgaatctggggcctgcatgagatacaaagaaa 60
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 726 ggaaggcgagcaagaatgtcacgcaaagtgaatctggggcctgcatgagacacaaagaaa 667
Query: 61 agatgaggggaaattgagcagaaggaactgagcctgtagtattgattcataagactgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 agatgaggggaaattgagcagaaggaactgagcctgtagtattgattcataagactgagt 607
Query: 121 tcatccaagctactgtgtggtgtgcatgctgcttatactttgctggcagaaatgttaccc 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tcacccaagctactgtgtggtgtgcatgctgcttatactttgctggcagaaatgttaccc 547
Query: 181 tgaacttgcaaatttctttctatcttccaagcccgatacattttatctttatgttttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgaacttgcaaatttctttctatcttccaagcccgatacattttatctttatgttttctc 487
Query: 241 tgaatgactcagaacaaggcagtgtcctcaactaatttcctagccaagcatgtgaaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgaatgactcagaacaaggcagtgtcctcaactaatttcctagccaagcatgtgaaaaat 427
Query: 301 aacctccatataggcacacacaggcccaaagcatatgttgaaaagatattctagctcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aacctccatataggcacacacaggcccaaagcatatgttgaaaagatattctagctcttt 367
Query: 361 tactgtataataagaaagttgggagtacagaatctagagaaagaaagctgctttcaaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tactgtataataagaaagttgggagtacagaatctagagaaagaaagctgctttcaaatc 307
Query: 421 aattgggtatgtgactctcgtcactgtatataaaactctctagtttcttacagaaggatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aattgggtatgtgactctcgtcactgtatataaaactctctagtttcttacagaaggatt 247
Query: 481 taggacatttaactgtatctttccccctttcaaattataggaacacaatgagttaatgca 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 246 taggacatttaactgtatctttccccctttctaattataggaacacaatgagttaatgca 187
Query: 541 tgtaaagtgctaagaaggatgcctttgctgtagaatcatccagtctttccaatagctaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tgtaaagtgctaagaaggatgcctttgctgtagaatcatccagtctttccaatagctaat 127
Query: 601 taatgggcatctattgtgcattagtaataattaactgtgtcctattgtccaagttctggg 660
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 taatgggcatctattgtgcattagtaataattaactgtgtcctactgtccaagttctggg 67
Query: 661 actgaatcacaac 673
|||||||||||||
Sbjct: 66 actgaatcacaac 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_p09.g1 MSMg01no493_p09.g1 CHROMAT_FILE:
MSMg01no493_p09.g1 PHD_FILE: MSMg01no493_p09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:41 2005
(656 letters)
>mm_chr5_58334339_58335395
Length = 1057
Score = 1255 bits (649), Expect = 0.0
Identities = 655/657 (99%), Gaps = 1/657 (0%)
Strand = Plus / Plus
Query: 1 acagtgatctatgggcaacacccgtcctcttgatttcctcttccactggtgaaactagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtgatctatgggcaacacccgtcctcttgatttcctcttccactggtgaaactagtc 260
Query: 61 tttctggctcctgcaggggcttgcttcggagatcttaaggctcctcattttgtcctgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctggctcctgcaggggcttgcttcggagatcttaaggctcctcattttgtcctgtga 320
Query: 121 ctttctctggctctttaagacatgtgactacaatactgcctttgggctaggaagactgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttctctggctctttaagacatgtgactacaatactgcctttgggctaggaagactgtt 380
Query: 181 ggcagatgtatttacacaaaactgagtgtgtctgtaagtgtggttgtgtgggagaactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcagatgtatttacacaaaactgagtgtgtctgtaagtgtggttgtgtgggagaactgt 440
Query: 241 gtttgcagtccttagagcagatgtatattaaccgaacaattcgcttttacttatatatgt 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 gtttgcagtccttagagcagatgtatattaactgaacaattcgcttttacttatatatgt 500
Query: 301 ttagcttcagttcaaagacaataaagaatctctctactgtatctaagtatgttaaaatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttagcttcagttcaaagacaataaagaatctctctactgtatctaagtatgttaaaatgt 560
Query: 361 catcaaacctgaaaaggcaatgaatctcagacaaggtgattaatctttaattagtaacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catcaaacctgaaaaggcaatgaatctcagacaaggtgattaatctttaattagtaacat 620
Query: 421 acggcttcctatcaagtgatcactgcttgattacacatcagaaggcctctcgccaatgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acggcttcctatcaagtgatcactgcttgattacacatcagaaggcctctcgccaatgct 680
Query: 481 tctattttttatgtttagtggtttgggcctgaatgcaacaaattttcctgccatcacatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctattttttatgtttagtggtttgggcctgaatgcaacaaattttcctgccatcacatc 740
Query: 541 tgactcaacagattgagttgatcatgcccacaggtatttgtgtagttggagtgttacatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgactcaacagattgagttgatcatgcccacaggtatttgtgtagttggagtgttacatg 800
Query: 601 tgaagaatatttcaccaatccctgtttgaaaa-catgcagttacagcctatttagag 656
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 801 tgaagaatatttcaccaatccctgtttgaaaaacatgcagttacagcctatttagag 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1057
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1047
Effective search space: 676362
Effective search space used: 676362
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
