XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGCGGAATTCATATC
ATTTCTATCTACATGAAAACCAAGTGTGTGTGAACCAGGCAGCACTAAAA
GCCAAAGATAGGATCCCCAAGGAGACTAGCCATCAGCAAACTTCAGATCT
CATCAAGAGATCCTGCCTCAAAGGGTAAGGTAGATCAATCAAGGAAGATT
CCGGAAACTAGCCTTAGGCCTCTATATGCAAGTACACACTCACGGACAAA
CATCTGCATACACATATGTGCCAAACAACTGCAAACATGTACATACACAT
CATACATGCAAACAGCAACCACAAAAATCACAAAAATATTTTACTGTCAT
GTACTATTGTTAAAATTATGACTAAATGCATTCAGTAGAAAGATTTAAGC
TTTGTTCATAAGTGTCCTGGGGTGGGGGTGGGCTTAGTTATTGCTATTAT
TGCTCCAGCACTTCTAGTAACAAATTTCCTAGTCATGCCTTCTTTTAAAG
CAAGAATAAAAATACGTAATGAGATGGGTCAGTTGGCACACACCTTTAAT
TCCAGCAATCAGGACAGAGGCAAGTGGGTCTTTGAGAGTTCAAGGCCAGC
CTGGTCTACATAGTGATGGTCAGGACCATGAGAGTCTCTGTCTCANAACA
AAAAACAAACAAGCAAAAACCCAAATAGAACCAAAACAAAGCTAAGTGAT
ATCTAACCTCAGAACTGATGACAGATGTGGAGATGCAACAGAC

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTTCATGTCTTTGAAGAGCATTCTGACATACAAAG
GGTTTACCACATTGATTACACTTGTAAGGTTTCTCTCCAGTATGAATTCT
TTCATGTTTTCGAAGTTGACTGTTACAGGCAAAGGCTTTACCACATTCAT
TACATTTATAAGGTTTCTCTCCAGTATGTATTCTTTTATGTACTTGGAAA
GAACTTTGATATGCAAAGGCTTTGCCACATTGATTACATTCATAGGGCTT
CTCTCCAGTATGTGTTCTTTTATGTATTCGCAAGTTTTTATGATATGCAA
AGCCTTTACCACACTGATTACATTTGTAAGGTTTCTCTCCAGTATGTGTT
ATTTTATGCTTTTTGAGATGACTGTGTTGTGCAAAGGCTTTACCACATTG
ATTACATTTGTAAGATTTCCCTCGAGTATGAATTCTTTCATGTTTTTGAA
ATTGATCATGAGAGGCAAAGGATTTACTACATTGCTTACATTCATAGGGT
TTCTCTCCAGTATGTGTTCTTTCATGTATTTGGAGAGTATGGTGTCCTGC
AAAGGCTTTACCACATTGACTGCATTTGTAGCGTTTCTCTCCAGTGTGTG
TTATTTTCTGCATTCGGAGACTACTGTGATGTAGAAAGGCTTCACTGCAC
TGAATGCCTTCATCGGGATTCTCTTCAGTATGACTTCTTTTAT

Query= MSMg01no494_h08.b1 MSMg01no494_h08.b1 CHROMAT_FILE:
MSMg01no494_h08.b1 PHD_FILE: MSMg01no494_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:18 2005
         (601 letters)



>mm_chr5_110643517_110644517
          Length = 1001

 Score = 1141 bits (590), Expect = 0.0
 Identities = 598/601 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaccaagtgtgtgtgaaccaggcagcactaaaagccaaagataggatccccaaggagac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aaaccaagtgtgtgtgaaccaggcagcactaaaagccaaagataggatccccaaggagac 608

                                                                       
Query: 61  tagccatcagcaaacttcagatctcatcaagagatcctgcctcaaagggtaaggtagatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tagccatcagcaaacttcagatctcatcaagagatcctgcctcaaagggtaaggtagatc 548

                                                                       
Query: 121 aatcaaggaagattccggaaactagccttaggcctctatatgcaagtacacactcacgga 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 547 aatcaaggaagattccggaaactagccttaggcctctacatgcaagtacacactcacgga 488

                                                                       
Query: 181 caaacatctgcatacacatatgtgccaaacaactgcaaacatgtacatacacatcataca 240
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 487 caaacatctgcatacacatatgtgccaaacaactgcaaacatgtatatacacatcataca 428

                                                                       
Query: 241 tgcaaacagcaaccacaaaaatcacaaaaatattttactgtcatgtactattgttaaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgcaaacagcaaccacaaaaatcacaaaaatattttactgtcatgtactattgttaaaat 368

                                                                       
Query: 301 tatgactaaatgcattcagtagaaagatttaagctttgttcataagtgtcctggggtggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tatgactaaatgcattcagtagaaagatttaagctttgttcataagtgtcctggggtggg 308

                                                                       
Query: 361 ggtgggcttagttattgctattattgctccagcacttctagtaacaaatttcctagtcat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggtgggcttagttattgctattattgctccagcacttctagtaacaaatttcctagtcat 248

                                                                       
Query: 421 gccttcttttaaagcaagaataaaaatacgtaatgagatgggtcagttggcacacacctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gccttcttttaaagcaagaataaaaatacgtaatgagatgggtcagttggcacacacctt 188

                                                                       
Query: 481 taattccagcaatcaggacagaggcaagtgggtctttgagagttcaaggccagcctggtc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 taattccagcaatcaggacagaggcaagtgggtctttgagagttcaaggccagcctggtc 128

                                                                       
Query: 541 tacatagtgatggtcaggaccatgagagtctctgtctcanaacaaaaaacaaacaagcaa 600
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 127 tacatagtgatggtcaggaccatgagagtctctgtctcaaaacaaaaaacaaacaagcaa 68

            
Query: 601 a 601
           |
Sbjct: 67  a 67


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)