GCTXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTTTATCT
CTGAGCTCCATTTTTTAATGGGGTTATTTGATTTTATGGAGTCCACATTC
TTGAGTTTTTTATATATATTGGATGTTAGTCCCCTATCTGATTTTGGATA
GGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAG
TGTCTTTTGCTGTACAGAAGCTTTGCAGTTTTATGAGGTTCCATTTGCCA
ATTCTTGATCTTACAGCACAAGCCATTACTGTTCTATTCAGGAATTTTCC
CCCTGTGCCCATATCTATCAGGCTTTTCCCCACTTTCACCTCTATAAATT
TCAGTGTCTCTGGTTTTATGTGTGGTTGCTTGATCCACTTAAATTTGACC
ATAGTACAAGGAGATAGGAATGGATCAATTCACATTCTTCTACATGATAA
CCAGCAGTTGTGCCAGCACCATTTGTTGAAAATGCTTTTTTTCCACTGAA
TGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTC
ATTTCTGGGTCTTCAATTCTATTCCATTCATCTACTTGTCTTTAGATATA
CCACTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTTAGTT
CAGGCATGGTGATTCCACCAGAGGTTATTTTATCCTTGAGAAGAGTTTTT
GCTACCCTAGGATTTTTGTTTTTCCAGATGATTTGGGGGATACTCCTTCT
AATTCATTGAAGAATGAGTTGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXAGTAGTGATGTGGCTAAGTTCAGTGAGCTTAACATCCATAC
GGAAGGACTGGAGTCTGAACACATACTCGCATACTACATGGCCTACATGT
CTCAGTGTTTATATGTGACACATAAAGTGGGCAAATTAAATTCAAACCGA
TTTACAATATTTAACTGTCACAACAAGGGAGGCACACAAAACCTGAACTC
AGAATTCTCACAATGACCTGAGTTCTACTGAAGGGTGACACTGTGGGGTG
CACCATCCAATGGCAGCCCGTCATCTCCTTTACCCTTTAAATGGATGAGA
CCTCAATTAAAATTCTCTTTATAGGGTTTCAGAGTATAGATGTAGTCTAC
AAGCAGTTTAAGCACAGCCACCTTTCTAGAAAGTGATGACCATGGAATGC
TTTCCATTGTGCATAGATACTCCCTGATACCAGATGTGGAAGGTGTTACA
CTATCTACACAGTGGAACACAGTTCAATAGTGCTAGGAAAAGAAGTCTAT
CACCACGGGAGGTGCAAAGGAAAAATATATTTTAGTTAGACATAGAACAA
CAAAAGAACACATAAAACTTGTTACCTTAGTTATATACTCTGAGAGATGA
ATTAGCAATTATATGCTTGTAGACTTTCAACTCCATGACATCAGTAAGAG
TGGAACAGCTATTANGGTTCAATACATTTTAGAAATTAAAAACTCTGGCA
GAAAGTTTGCATACCTTACGCCAAT

Query= MSMg01no494_n24.g1 MSMg01no494_n24.g1 CHROMAT_FILE:
MSMg01no494_n24.g1 PHD_FILE: MSMg01no494_n24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:49 2005
         (613 letters)



>mm_chr5_82125223_82126235
          Length = 1013

 Score = 1013 bits (524), Expect = 0.0
 Identities = 584/612 (95%), Gaps = 14/612 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtagtgatgtggctaagttcagtgagcttaacatccatacggaaggactggagtctgaa 60
           ||||| ||| ||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 201 agtagcgatatggctaagttcagcgagcttaacattcatacggaaggactggattctgca 260

                                                                       
Query: 61  cacatactcgcatactacatggcctacatgtctcagtgtttatatgtgacacataaagtg 120
           ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 261 cacatactcgcatactacatggcttacatgtctcagtgtttatatgtaacacataaagtg 320

                                                                       
Query: 121 ggcaaattaaattcaaaccgatttacaatatttaactgtcacaacaagggaggcacacaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaaattaaattcaaaccgatttacaatatttaactgtcacaacaagggaggcacacaa 380

                                                                       
Query: 181 aacctgaactcagaattctcacaatgacctgagttctactgaagggtgacactgtggggt 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 aacctgaactcagaattctcacaatgacctgagttctactgaagggtgacaccgtggggt 440

                                                                       
Query: 241 gcaccatccaatggcagcccgtcatctcctttaccctttaaatggatgagacctcaatta 300
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||     
Sbjct: 441 gcactatccaatggcagcctgtcatctcctttaccctttaaatggatgagacctc----- 495

                                                                       
Query: 301 aaattctctttatagggtttcagagtatagatgtagtctacaagcagtttaagcacagcc 360
                   ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 --------tttatagggtttcagagtatagatgtagtctacaagcagtttaagcacagcc 547

                                                                       
Query: 361 acctttctagaaagtgatgaccatggaatgctttccattgtgcatagatactccctgata 420
           |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 548 acctttctggaaagtgatgaccgtgggatgctttccattgtgcatagatactccctgata 607

                                                                       
Query: 421 ccagatgtggaaggtgttacactatctacacagtggaacacagttcaatagtgctaggaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ccagatgtggaaggtgttacactatctacacagtggaacacagttcaatagtgctaggaa 667

                                                                       
Query: 481 aagaagtctatcaccacgggaggtgcaaaggaaaa-atatattttagttagacatagaac 539
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 668 aagaagtctatcaccacgggaggtgcaaaggaaaatatatattttagttagacatagaac 727

                                                                       
Query: 540 aacaaaagaacacataaaacttgttaccttagttatatactctgagagatgaattagcaa 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 aacaaaagaacacataaaacttgttaccttagttatatactctgagagatgaattagcaa 787

                       
Query: 600 ttatatgcttgt 611
           ||||||||||||
Sbjct: 788 ttatatgcttgt 799


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)