NNNNTTTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACCTTTTCTGCCTGCTTCTGCCTCCTAAGTGCTGGACT
AAAGGCTTGTGCTGCCATGCCTGGCCTTAGTTCAAGTTTTTAAAGAAGAG
GGAGAAAGAGGGAGAGAGAGACTAGTTTTCAACTGCTTGAAGAATGTATC
ACTTCTTAGACAAAAACACTTATGCAATTCCTCACAGTCGCAATTAAACA
GGAAATGGCACTAATGTCCAAACACAAGTCCTCAACTTCTGTTACCGTCT
TCCTCTCAGTTTTTGGTGTTTGCCTATGAAACAAAGTGTTCACCCATATA
TCAGACTAGTTTCCATTATCCGTCTGTCCTAATGTATGGTAGGAAAACAA
AGATCAACTCACAGAACTGGCTGTTATGTATCCCACTCCCTTTTAAACTT
GTCTAGAAAAAAATCACAGCTGATACTATAATAACTGCTTAATTATAACA
AAATATTTGGTTTTGAAAATACCCTTTTAAGGCAAGTGTGGCGACTCATG
CTTCTAATACCAGCAGTTGGGAGTCTGAGGCAGGAGGACTGACATGAGTT
CCATGTCAGTCTGTGCTTTGTCACCTAATGAATTTCAGATCAGCCAGGAC
TACAGAGTGAGATCCTATTTCAGAGGACGAACAAGTCTGTCAGCCAATCG
TGGTTGTGCACTCCTTTAATCCCAGCACTCTGGAGGCAGAG

TTATTTTTCAATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTAAGCTCTGCAC
CCCATTTTTAATGGGGTTATTTGAATTTTGGAGTCCACCTTCTTGAGTTC
TTTATATATATTGGATATTAGTCCCCTGTCTGATTTAGGATAGGCAAAGG
TCCTTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACGGTGTCTTTT
GCCTTACAGAAGCTTTGTAATTTTATGAGGTCCCATTTGTCGATTCTCGA
TCTGACAGCACAAGTCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTGC
CCATATCTTTGAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTC
TCTGGTTTTATGTGGAGTTCCTTGATCCACTTAGATTTGGCCTTAGTACA
AGGATATAGGAGTGGATCAATTTGCATTCTTCCACATGATAACCACCAGT
TGTGCAAGCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTAGATGGTT
TTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTC
TGGGTCTTCAATTCTATTTCATTGGTCTACTTGTCTGTCGCTATACCAGT
ACCATGCAGTTTTTAATCACAATTGCTCTGTAGTACAGCTTTAGGTCAGC
CATGGTGATTCCACCAGAGGTTTCTTTATCCTTGAGGAGAGGN

Query= MSMg01no497_f19.b1 MSMg01no497_f19.b1 CHROMAT_FILE:
MSMg01no497_f19.b1 PHD_FILE: MSMg01no497_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:01 2005
         (682 letters)



>mm_chr5_65507446_65508528
          Length = 1083

 Score = 1243 bits (643), Expect = 0.0
 Identities = 661/667 (99%), Gaps = 1/667 (0%)
 Strand = Plus / Minus

                                                                       
Query: 17  tctgcctgcttctgcctcctaagtgctggactaaaggcttgtgctgccatgcctggcctt 76
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tctgcctgcttctgcctcctaagtgctggactaaaggcttgtgctgccatgcctggcctt 676

                                                                       
Query: 77  agttcaagtttttaaagaagagggagaaagagggagagagagactagttttcaactgctt 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agttcaagtttttaaagaagagggagaaagagggagagagagactagttttcaactgctt 616

                                                                       
Query: 137 gaagaatgtatcacttcttagacaaaaacacttatgcaattcctcacagtcgcaattaaa 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gaagaatgtatcacttcttagacaaaaacacttatgcaattcctcacagtcgcaattaaa 556

                                                                       
Query: 197 caggaaatggcactaatgtccaaacacaagtcctcaacttctgttaccgtcttcctctca 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 555 caggaaatggcactaatgtccaaacacaagtcctcaacttctgttaccgtcttcctccca 496

                                                                       
Query: 257 gtttttggtgtttgcctatgaaacaaagtgttcacccatatatcagactagtttccatta 316
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 495 gtttttggtgtttgcctatgaaacaaagtgttcacccatacatcagactagtttccatta 436

                                                                       
Query: 317 tccgtctgtcctaatgtatggtaggaaaacaaagatcaactcacagaactggctgttatg 376
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 435 tccgtctgtcctaatgtatggtaggaaaacaaagatcaactcacagaactggctgttacg 376

                                                                       
Query: 377 tatcccactcccttttaaacttgtctagaaaaaaa-tcacagctgatactataataactg 435
           ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 375 tatcccactcccttttaaacttgcctagaaaaaaaatcacagctgatactataataactg 316

                                                                       
Query: 436 cttaattataacaaaatatttggttttgaaaatacccttttaaggcaagtgtggcgactc 495
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cttaattataacaaaatatttggttttgaaaatacccttttaaggcaagtgtggcgactc 256

                                                                       
Query: 496 atgcttctaataccagcagttgggagtctgaggcaggaggactgacatgagttccatgtc 555
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 255 atgcttctaataccagcagttgggaggctgaggcaggaggactgacatgagttccatgtc 196

                                                                       
Query: 556 agtctgtgctttgtcacctaatgaatttcagatcagccaggactacagagtgagatccta 615
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 agtctgtgctttgtcacctaatgaatttcagatcagccaggactacagagtgagatccta 136

                                                                       
Query: 616 tttcagaggacgaacaagtctgtcagccaatcgtggttgtgcactcctttaatcccagca 675
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tttcagaggacgaacaagtctgtcagccaatcgtggttgtgcactcctttaatcccagca 76

                  
Query: 676 ctctgga 682
           |||||||
Sbjct: 75  ctctgga 69


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1083
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1073
Effective search space:   721056
Effective search space used:   721056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)