Query= MSMg01no499_c22.b1 MSMg01no499_c22.b1 CHROMAT_FILE:
MSMg01no499_c22.b1 PHD_FILE: MSMg01no499_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:30 2005
(678 letters)
>mm_chr5_38409122_38410199
Length = 1078
Score = 1123 bits (581), Expect = 0.0
Identities = 640/673 (95%), Gaps = 21/673 (3%)
Strand = Plus / Minus
Query: 6 gaattccatatcgtgtccgactttgaacttcattctttctgcccccacctcacaagtact 65
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaattccatatcgtggacgactttgaacttcattctttctgcccccacctcacaagtact 684
Query: 66 gggattataggtgagcactacaccaggcccagcttgtatacattaggcacgaaacctatg 125
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 683 gggattataggtgagcactacaccaggcccagcttgtataaattaggcacgaaccctatg 624
Query: 126 gccttttgcatcctaggcacacatgataccagccatggcctcatagccaactgcaatact 185
||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||
Sbjct: 623 gccttttgcatcctaggcatacatgataccagccatggccccatagccaactgaaatact 564
Query: 186 atatatacttcttactgttatttcacagccttcttctcttagaactgagctctctgtaat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atatatacttcttactgttatttcacagccttcttctcttagaactgagctctctgtaat 504
Query: 246 gggctgcattttatattagcaatgaatcccatctcctttttcatgatctctcattaactt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gggctgcattttatattagcaatgaatcccatctcctttttcatgatctctcattaactt 444
Query: 306 cattttctcttgggcttgatccagtctgcttttctgatggtagcctaggaaccctggctt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cattttctcttgggcttgatccagtctgcttttctgatggtagcctaggaaccctggctt 384
Query: 366 gcttatacttgtgtcctattgccagatgtgtggctagctatgccagctaggcttgatttc 425
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 383 gcttatacttgtgtcctat---------------------tgccagctaggcttgatttc 345
Query: 426 tacgctgggcaggcatcctctccagtgaagaacttgaggttgattgtgggtatgttctaa 485
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tacactgggcaggcatcctctccagtgaagaacttgaggttgattgtgggtatgttctaa 285
Query: 486 gatgtccttatgacaaaaccatctaacagtgccttcctcagaacagacactggctgctat 545
||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||
Sbjct: 284 gatgtccttatgacaaaaccatccaatagtgccttcctcagaacagacactggttgctat 225
Query: 546 gtgactaaagattgaatggttcttcagtcactggtacccccttaagtcttgcactgactc 605
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gtgactaaaaattgaatggttcttcagtcactggtacccccttaagtcttgcactgactc 165
Query: 606 tcctgactttcaaatctccctccctggctttgaaccccaacaaatatcttaatcagatcc 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tcctgactttcaaatctccctccctggctttgaaccccaacaaatatcttaatcagatcc 105
Query: 666 ttgcctgacttag 678
|||||||||||||
Sbjct: 104 ttgcctgacttag 92
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_c22.g1 MSMg01no499_c22.g1 CHROMAT_FILE:
MSMg01no499_c22.g1 PHD_FILE: MSMg01no499_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:30 2005
(553 letters)
>mm_chr5_38216959_38217911
Length = 953
Score = 1069 bits (553), Expect = 0.0
Identities = 553/553 (100%)
Strand = Plus / Plus
Query: 1 cctggccttttaactgggcgcaataaaaagctgtagattaggggcgaccagattaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctggccttttaactgggcgcaataaaaagctgtagattaggggcgaccagattaaggaa 260
Query: 61 aatgaattactttattacccagacggcgtccggggtctggagggaggggttgggctgcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgaattactttattacccagacggcgtccggggtctggagggaggggttgggctgcgg 320
Query: 121 acgccagagagatcggagcctcacatctgcccacagggcctggagaaataggaaggcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgccagagagatcggagcctcacatctgcccacagggcctggagaaataggaaggcctg 380
Query: 181 gggcgggttcgggaatactcgcttctgtgaaatgtctggatttcttacgtttctgaggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcgggttcgggaatactcgcttctgtgaaatgtctggatttcttacgtttctgaggct 440
Query: 241 gtgaggaggcactgcgtagggcttgggactcaagctcatttaggcccagctggacgcccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgaggaggcactgcgtagggcttgggactcaagctcatttaggcccagctggacgcccg 500
Query: 301 ctgtactgggtcccctgaggtttgttccatgtgtatgggaagtagaagccataccgtccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtactgggtcccctgaggtttgttccatgtgtatgggaagtagaagccataccgtccc 560
Query: 361 gttttaaagccctgcaaacgaaagttaagcgacagtgtaggccaaatccttagctcgaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttttaaagccctgcaaacgaaagttaagcgacagtgtaggccaaatccttagctcgaag 620
Query: 421 cctagaaggtacggagaactgtagtttaagaactaattaggcagttgctagatcatctcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cctagaaggtacggagaactgtagtttaagaactaattaggcagttgctagatcatctcg 680
Query: 481 ttctatagcgtcagccgatttacactctgcgctcggattaaaacagaaatggaaataaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctatagcgtcagccgatttacactctgcgctcggattaaaacagaaatggaaataaat 740
Query: 541 ctcccaaatggct 553
|||||||||||||
Sbjct: 741 ctcccaaatggct 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
