XXXXXXXXXXXXXXXXXXXXXXXXXTTCTAGAATCCGCGGAATTCTTTAC
ACTTTCCGAGATTGGTTTTTGCATTGTTTGGATTGGGACTGCGCCGTCAT
TCTTACATCATGAGCTCTTGATGTAAAAAATTGTTTAGCTTATTTTTGAT
GTTATAGGAGTCCCCGCAGTTGAAGGACTTTTAACTTTTAAAATAAGTTT
TGGATTTTACAAGAGACTCTAGATTCTTAGAGACTGAACTTTTAAAATGT
TTGGATTGGTAAAGACTTGTGGGACTTCTACATTTGTGATATGTTTGATC
TTTATGATATTTTATAGTATGAAGTCTTGGGGATTACACAACTTCTCTCT
CTGAAAAAAAAGGGGGGGGAGATTTTGTCTTTAAAAGTGCCACATGAGCC
AGGCGTGGTGGCGCATGCCTTTAATCCCAGCACTGGAGGCAGAGACAGGT
GTATTTCTGAGCTCAAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACA
GCCAGGGCTATAAAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAAAAAA
AAGTGCCATGCGTCAAGTTGTCAAGGGAGTCAACTGTGCTGGCTAGTTCT
ATGTCAACTTGACCCAAGCTGGAGTCATCTGAGAGGAGGGAACCTCTGTT
CCCTAATTGAGAAAATGTCTCAGTAAGATTGGGCTGTAGGATCACCTGGA
GAGCACTTTCTTAATTATTGATTGAGGGGGGGG

CGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTGTTTTTAACTCGCGGTGACATGAT
TCCGTGGGTAAAAGCCCCAAGTACTCGTGACATAGTGGCAGGAATCTCTG
CTTGGTAAGCCTGGTTAAGCTCCCTGTACCAAGCATGGAGTTTCTCACGG
TGTCCGATGAAGACCAGGCAGGCGCTGCTTTGGAACCCTGATAGCTTGCA
GGGACAAGGAACAGGAGGAGCAAGGGTATGTGTGTATGTGTGTGTGTGTC
TACGGCTGGCAGTGATGGAGACTGCCGCCAGGCATGGAGGGAAGACAGCT
TGAAGAAATCTTTAGGGAAGTAAGACAATCACTAGGGGCAGCTGTCTGAG
CCGGAAGCCACACACAGGCCACAGTTTTCCACAAGGGTTTAGCCACGTCC
CAGTACAGAAGGTCACAGCTCGCTGACCCCTGTGTCAGATGAGGGTCACA
GGAGCAGGAGGCTGCGCTCCATACCGGTGTCTTCCTGACCTTGAGGAAGT
CACCCTGTCTCTGGGTCCTGTGGTTCCCTTTTGGCAAGGTAGGAGTAAGG
ATGCCTGTGAGGTGAGGAGGATCCTTGCGGGGGGGGGGGGTTTTAGGGGT
TTTNTNTTTTTTTTTTTTTTTTGGTGTTGTNTTTTTTTGTTGTTTCTTTT
TGTTTGGTGTGTTTTGTTTTGGTGGGTTTTGTAGTGGNTTTATTTT

Query= MSMg01no499_j24.g1 MSMg01no499_j24.g1 CHROMAT_FILE:
MSMg01no499_j24.g1 PHD_FILE: MSMg01no499_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:03 2005
         (540 letters)



>mm_chr5_116681124_116682068
          Length = 945

 Score =  907 bits (469), Expect = 0.0
 Identities = 525/547 (95%), Gaps = 9/547 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttgtttttaactcgcggtgacatgattccgtgggtaaaagccccaagtactcgtgacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tttgtttttaactcgcggtgacatgattccgtgggtaaaagccccaagtactcgtgacat 686

                                                                       
Query: 61  agtggcaggaatctctgcttggtaagcctggttaagctccctgtaccaagcatggagttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtggcaggaatctctgcttggtaagcctggttaagctccctgtaccaagcatggagttt 626

                                                                       
Query: 121 ctcacggtgtccgatgaagaccaggcaggcgctgctttggaaccctgatagcttgcaggg 180
           |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 625 ctcacggtgtccgatgaagaccaggcaggcactgctttggagccctgatagcttgcaggg 566

                                                                       
Query: 181 acaaggaacaggaggagcaagggtatgtgtgtatgtgtgtgtgt-gtctacggctggcag 239
           |||||||||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||
Sbjct: 565 acaaggaacaggaggagcaagggtgtgtgtgtgtgtttgtgtgttgtctacggctggcag 506

                                                                       
Query: 240 tgatggaga------ctgccgccaggcatggagggaagacagcttgaagaaatctttagg 293
           |||||||||      |||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 505 tgatggagatggagactgccgccaggcgtggaaggaagacagcttgaagaaatctttagg 446

                                                                       
Query: 294 gaagtaagacaatcactaggggcagctgtctgagccggaagccacacacaggccacagtt 353
            ||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 445 -aagtaagacgatcactaggggcagctgtcggagccggaagctac-cacaggccacagtt 388

                                                                       
Query: 354 ttccacaagggtttagccacgtcccagtacagaaggtcacagctcgctgacccctgtgtc 413
           |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 387 ttccacgagggtttagccacgtcccagtacagaaggtcacagctcgctgactcctgtgtc 328

                                                                       
Query: 414 agatgagggtcacaggagcaggaggctgcgctccataccggtgtcttcctgaccttgagg 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agatgagggtcacaggagcaggaggctgcgctccataccggtgtcttcctgaccttgagg 268

                                                                       
Query: 474 aagtcaccctgtctctgggtcctgtggttcccttttggcaaggtaggagtaaggatgcct 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 267 aagtcaccctgtctctgggtcctgtggttcccttttggcaaggtaggagtaaggatgccc 208

                  
Query: 534 gtgaggt 540
           |||||||
Sbjct: 207 gtgaggt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 945
Length adjustment: 10
Effective length of query: 530
Effective length of database: 935
Effective search space:   495550
Effective search space used:   495550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)