CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCTTATCCTGGGAA
NNCAGAANGNAGTTTTCCAGGATGAGGAGATCNGCNCCACCAGCCTCTAC
TTACAGAGTGCTGGGATTTCTTATTCATGTCATAATTCCTGATTTTTGCC
ATGAGGTAAATGGAATCCAAAGCTTCCCGCAGTTTAGGGATGCGTGAAAC
TGAGAACCACATCCTCGGCCCCAAGGTTCTCCATGTAGGTGCAACATTAT
GAACTTTTCTTTACCCCAGAGCTCTTGTCTCTAGCTGCATATGTATCAAA
AGATGGCCTAGTCGGCCATCACTTTATTGTTTTGCCCATTGGACAGGCAA
ACTTTATATGCCCCTTTACTGGGGAACACCAGGGCCAAAAAATGGGAATG
GGTGGGTAGGGGAGTGGTGGGGCCTTTCTTTTTTTTTTTTTAATCTTCAT
TTTTTATTTAACTTATTATTTTATATTATTTACTATATCTTTTTGAAAAT
ATTTATTTTTCTTTTCTTTCCTTTTATTTTTTCTTTTGTTTTAAATTCTT
AGGTAATTAATTCATTTTACTTTTTTTTCTCTCACCTTTATTATTTTTAA
TTTCTAATAATTATTATATTCACCTCTTTTTATTTATATCATATTTATTT
ATTTTTTGGCAAGAGACGATTATAAAATTATTTTTTTTTTTTTATGGGAG
ATTATTCGTCTCCTACATTATTTACTCACCTTCCTCTTTATTTTTACTCT
TTCACTCCTTTCTTATTACAACTCATATTTCTTTTTATTTATTTCACTCA
C

CAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTTTCCGAATTACTCCTAAGTTTTGTATTTCTAATATCTT
CACAGATGATTCTGCAGCTATGTGTTTAAGAGGTATTATTTGAAAGATAT
GGTATCCAGGTAACTTGAAAAAATAAACTTATCTCAGTATTTATATGAAG
CAAACTTCTATGTATACCTAAAGAGTATAGAAATACACAAATATGTATGT
ATCAATAAATATAGGTATATTAACTCAAAGATTACCAATTTTAATAATAT
GAGAAATTTCAGAAAAGGGTGCTAATTTATATATAAGTATTGTAGAGCAT
AAATGAGTCACTTTGAATAAAAGATTTCCTCTTCAGTTTCATCCATAAAA
CAAGTGCTGTCTTAGTGACCATGAAGAATTCAGATGAGTATCTTTGACAG
GATGTCAGTTTGGGACTGCCTTATCGATGACAAAAAACAAAGTGCATTTG
ATTGTTGAGATAAGCGGCATTATAAATAGAGAGAAACACAGCATGTTTTT
TCCCTCTGTCTGTTAGAAAAAGGGTGTCTTATCATATTACCATCTTTATA
ATAATTAAACAACACATACAATTTTGCAAATTGACAGATAAAGAAGCTGC
ATATGGCAGATTGATCACCAAAGCCCATTAGACAACCCCCTTTAGAAATC
ACTGATAATTTCTGTAGTAAATGATTCATGAAGATGACTCATGCTGCAAG
TGGTCATTTCAAGGCACTACT

Query= MSMg01no499_k10.g1 MSMg01no499_k10.g1 CHROMAT_FILE:
MSMg01no499_k10.g1 PHD_FILE: MSMg01no499_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:05 2005
         (676 letters)



>mm_chr5_18971428_18972503
          Length = 1076

 Score = 1284 bits (664), Expect = 0.0
 Identities = 673/676 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctaagttttgtatttctaatatcttcacagatgattctgcagctatgtgtttaagaggt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 876 cctaagttttgtatttctaatatcttcacagatgattctgcagctatgtgcttaagaggt 817

                                                                       
Query: 61  attatttgaaagatatggtatccaggtaacttgaaaaaataaacttatctcagtatttat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 attatttgaaagatatggtatccaggtaacttgaaaaaataaacttatctcagtatttat 757

                                                                       
Query: 121 atgaagcaaacttctatgtatacctaaagagtatagaaatacacaaatatgtatgtatca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 atgaagcaaacttctatgtatacctaaagagtatagaaatacacaaatatgtatgtatca 697

                                                                       
Query: 181 ataaatataggtatattaactcaaagattaccaattttaataatatgagaaatttcagaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ataaatataggtatattaactcaaagattaccaattttaataatatgagaaatttcagaa 637

                                                                       
Query: 241 aagggtgctaatttatatataagtattgtagagcataaatgagtcactttgaataaaaga 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aagggtgctaattaatatataagtattgtagagcataaatgagtcactttgaataaaaga 577

                                                                       
Query: 301 tttcctcttcagtttcatccataaaacaagtgctgtcttagtgaccatgaagaattcaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tttcctcttcagtttcatccataaaacaagtgctgtcttagtgaccatgaagaattcaga 517

                                                                       
Query: 361 tgagtatctttgacaggatgtcagtttgggactgccttatcgatgacaaaaaacaaagtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tgagtatctttgacaggatgtcagtttgggactgccttatcgatgacaaaaaacaaagtg 457

                                                                       
Query: 421 catttgattgttgagataagcggcattataaatagagagaaacacagcatgttttttccc 480
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 456 catttgattgttgagataagcggcattacaaatagagagaaacacagcatgttttttccc 397

                                                                       
Query: 481 tctgtctgttagaaaaagggtgtcttatcatattaccatctttataataattaaacaaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tctgtctgttagaaaaagggtgtcttatcatattaccatctttataataattaaacaaca 337

                                                                       
Query: 541 catacaattttgcaaattgacagataaagaagctgcatatggcagattgatcaccaaagc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 catacaattttgcaaattgacagataaagaagctgcatatggcagattgatcaccaaagc 277

                                                                       
Query: 601 ccattagacaaccccctttagaaatcactgataatttctgtagtaaatgattcatgaaga 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ccattagacaaccccctttagaaatcactgataatttctgtagtaaatgattcatgaaga 217

                           
Query: 661 tgactcatgctgcaag 676
           ||||||||||||||||
Sbjct: 216 tgactcatgctgcaag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space:   709956
Effective search space used:   709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)