GCTATACGACTCACTATAGTTTTCAAATCCGCGGAATTCTTCATAGCTTA
CCGAAGAACCTGAAGCTTGGTCAGGAGGGAGATGAGAAATGAACTCTTCT
GCTGCTTACTCCAGTAGAAAAGAAGGACTTGTATTCTAAGTGAAGAATTC
AGGGATAGAGGCAGTGGACAGTGAGTTCCCAGCATGCACTAGGAAAACAC
TTGACAGGATATGGCTTTGTGAGTTCCAGGGTGATGTGATTTTATGGTGA
GTGTTTATACTTGCCTGGCAGGTGACTGAGTGCTTGGAAGCTCCTCGTAT
TATCTATAGGGGCCTGGTCCCACATTTTACTTCTCAGTGCATGTCTAGAA
GGCCTCAGACTCATTCCTGTTCCTCTTTGTCTGTTGCAAGACAGTAATGT
TGCAGACATTTCTATTGCATCTCATTGTGCTCTCTGTTTCTGCCTTTGTC
TCACATTCTTTGACTGTTTCCTTTTCTCCTCCTTTGTGTGTGTGTGTGTT
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGNNTNNNNNNTGTGTGTTTG
TGTGTGGGNTNNTGTGTTTTTTTTGNGTNTGTTTTTTGTTTGTTTTGTTT
GTGGTGCCGTGTTGTTTTTTTTTGTTTTTTTGTTNTTTGTGTTTGTTGTT
TTTTTGTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXATGTTGATACTCTTTAAAAACAAATCATTTAACTCCACATCA
GTTAGTGGTAACTTGAGAAAAGATATATAGATGTATGTATATACATAAAT
GTGTGTGTGTGTGTTTAATTCCATTTTTGAAATTTGAATTATGGAAGGGA
GTTGTAGAAATCTTCCTTGTTGTTTGCAATAACTGTGGGTACTTTAATCT
TAAATAAAACAAAAACAACAACAACATAAAACCAAAACCAAAAACAAAAA
ACAAAATGAAACAAAACCTGTTTGTCAAGAAGACAGTGTTCCAAGAATTC
AGATTCAAAAGGAGAAAATCAGCATTCCTGGGGGTCTGGAGGTTAGGAAT
CAATACTCTCGGATGTTTTGCAAGCTTGGGTTTTGCATTTATGTTTTTTA
TGCGATTCCTGAAAAATGGAAACGGAAGTGTCTTAGGGTCTATATCAGCC
TTGATGTGCCCTTTGGGGTGTGTGCGTGTGTGTGTGTGTCTTTCCCTTCT
ATTTCTCCTGTTTCAATTTCCTTGTGTTTGCTTTATATATTATTTTTATT
TTATCCCTTAGCTGCCTGTTTGTTTTCTAAAGAGGGTAGATGGGGGGGGG
GTTGATAGAGAGAAAATT

Query= MSMg01no500_d22.g1 MSMg01no500_d22.g1 CHROMAT_FILE:
MSMg01no500_d22.g1 PHD_FILE: MSMg01no500_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:51 2005
         (563 letters)



>mm_chr5_13943635_13944596
          Length = 962

 Score =  992 bits (513), Expect = 0.0
 Identities = 552/577 (95%), Gaps = 21/577 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgttgatactctttaaaaacaaatcatttaactccacatcagttagtggtaacttgaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 atgttgatactctttaaaaacaaatcatttaactccacatcagttagtggtaacttgaga 863

                                                                       
Query: 61  aaagatatatagatgtatgtatatacataaatgtgtgtgtgtgtgtttaattccattttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 aaagatatatagatgtatgtatatacataaatgtgtgtgtgtgtgtttaattccattttt 803

                                                                       
Query: 121 gaaatttgaattatggaagggagttgtagaaatcttccttgttgtttgcaataactgtgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gaaatttgaattatggaagggagttgtagaaatcttccttgttgtttgcaataactgtgg 743

                                                                       
Query: 181 gtactttaatcttaaataaaacaaaaacaacaacaacataaaaccaaaaccaaaaacaaa 240
           |||||||||||||||||||||||||      |||||||||||||||||| ||||||||||
Sbjct: 742 gtactttaatcttaaataaaacaaa------aacaacataaaaccaaaaacaaaaacaaa 689

                                                                       
Query: 241 aaacaaaatgaaacaaaacctgtttgtcaagaagacagtgttccaagaattcagattcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aaacaaaatgaaacaaaacctgtttgtcaagaagacagtgttccaagaattcagattcaa 629

                                                                       
Query: 301 aaggagaaaatcagcattcctgggggtctggaggttaggaatcaatactctcggatgttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aaggagaaaatcagcattcctgggggtctggaggttaggaatcaatactctcggatgttt 569

                                                                       
Query: 361 tgcaagcttgggttttgcatttatgttttttatgcgattcctgaaaaatggaaacggaag 420
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 568 tgcaagcttgggttttgcatttatgttttttatgcgattcctg-aaaatggaaacggaag 510

                                                                       
Query: 421 tgtcttagggtctatatcagccttgatgtgccctttggg--------------gtgtgtg 466
           |||||| ||||||||||||||||||||||||||||||||              |||||||
Sbjct: 509 tgtctttgggtctatatcagccttgatgtgccctttggggtgtgtgtgtgtgtgtgtgtg 450

                                                                       
Query: 467 cgtgtgtgtgtgtgtctttcccttctatttctcctgtttcaatttccttgtgtttgcttt 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 449 tgtgtgtgtgtgtgtctttcccttctatttctcctgtttcaatttccttgtgtttgtttt 390

                                                
Query: 527 atatattatttttattttatcccttagctgcctgttt 563
           |||||||||||||||||||||||||||||||||||||
Sbjct: 389 atatattatttttattttatcccttagctgcctgttt 353


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 962
Length adjustment: 10
Effective length of query: 553
Effective length of database: 952
Effective search space:   526456
Effective search space used:   526456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)