XXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATCCGCGGAATTCCAGA
CAATGTACGCTAAACTTAGCCTAAATGAATAATTCTTCCGTAACTCACAC
ATGTGAGGAGAAGCAGAGCGCCTTATTAAATCTAAACCAATAGTGAATGA
ATTCACTAACTACCCTTCCCTGCTGGGGCATTTAGCCTTTAGTAGCCTTG
AGGTCTAAACTGTGCAGAATGTAAATCCTCATTAATTTAAAGTAAAAGAA
AGTCACAAATGTAGTAGTCACTTACAATACTCTATTTTCTAATTCAAAGT
GATGGGTAATTAGAAGTAAGAAAACTATTCTCTAGACAGCTAGTCAGGTC
ACAGACATAAGCAAACAAAAGTGTATGTATGTCCTGGCAAAACTGGAAGC
TAAGTGTAAGAAAAAATGTTTCTTAGTAAACTCTACACAATGAGTGAAAA
AGGCTAGGGCCAAATAAAGAGCTCAGGATTTCAAAGACTACCCAGCCTCA
TTAAAAAGAANAAAAAAAAAAACCAAAAAACAATTGTCAGGCTTTCTTCT
TTTTTAATTTTCTGATTTCTTTTACATGGGGGCTATGGTGGGCCTTTTCC
TGAGTCTGTACTCTTTCATTCTATCTCCTTGACCAATCCATTCAACCCCT
TGAATCTTCCCCATTGGACTCTCCAAATATTTTTAATTAAATAAATTAGT
TTTTACCCCACCCTGATGCCA

CGATGATATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTATTTAGCTCTGTACCCCCATTTTA
ATTGGGTTATTCGGGTTTTTTTGGAGTCTAACCTTTTAGGTTCTTCATAT
ATTTTGTATATTAGCCATCTATCAGATGTAGGATTAGTAAAGATCTTTTG
CCAAACTGTAGGTTACTGTTCTGTCCTATTGGAAGAAGGAAGAAGGGACC
TGAGTAGAAGAGGGAAGAGTGAGTAGAAAAGCAGGCAAGATCAGGTATGA
GGGGAAGACAGGAGAGTAGCCCAAAGGATCAGGGGAATAAATGGAAATAT
GCAGCTTCAGGGGTTGGGGGGTAGAGTAACCTCTAGAATGTCCCAGAGAT
CTGGGATATGATAGGCTTCCAGGACTCAATGGAGATGACCTTAGACATAG
AGCCCAACAGTCAGGGGATGGAACCTGAAAATACCACCTCCAGTACATAC
ACAGAGCCCACAGTGGAGGGACAGAGCCACCCACATACCTTCAAACATTT
TGACCCAGAGTTGTTCTTGTCTAAAAGAAATTAAGTGACAAAAATGGAGC
AGAGGTTGAAGGAAAGAACTCCAGTGACCAGCCCAACTTGGGATCCATGC
CATGGGCAGGCACCAAACTCTGGCATTATTAAAAATGTCATGTTGTGCTT
CTAGACAGGATCTTAGCATGGCTGCTCTCTGAGAGGN

Query= MSMg01no500_e16.b1 MSMg01no500_e16.b1 CHROMAT_FILE:
MSMg01no500_e16.b1 PHD_FILE: MSMg01no500_e16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:54 2005
         (417 letters)



>mm_chr5_69431196_69432012
          Length = 817

 Score =  768 bits (397), Expect = 0.0
 Identities = 412/417 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctaaacttagcctaaatgaataattcttccgtaactcacacatgtgaggagaagcagagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaaacttagcctaaatgaataattcttccgtaactcacacatgtgaggagaagcagagc 260

                                                                       
Query: 61  gccttattaaatctaaaccaatagtgaatgaattcactaactacccttccctgctggggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccttattaaatctaaaccaatagtgaatgaattcactaactacccttccctgctggggc 320

                                                                       
Query: 121 atttagcctttagtagccttgaggtctaaactgtgcagaatgtaaatcctcattaattta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 321 atttagcctttagtagccttgaggtctaaactgtgcagaatgtaaatcctcattaatttg 380

                                                                       
Query: 181 aagtaaaagaaagtcacaaatgtagtagtcacttacaatactctattttctaattcaaag 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 aagtaaaagaaagtcacaaatgtagtagtcacttacaatactctatcttctaattcaaag 440

                                                                       
Query: 241 tgatgggtaattagaagtaagaaaactattctctagacagctagtcaggtcacagacata 300
           ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 441 tgatggggaattagaagtaagaaaactaatctctagacaactagtcaggtcacagacata 500

                                                                       
Query: 301 agcaaacaaaagtgtatgtatgtcctggcaaaactggaagctaagtgtaagaaaaaatgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcaaacaaaagtgtatgtatgtcctggcaaaactggaagctaagtgtaagaaaaaatgt 560

                                                                    
Query: 361 ttcttagtaaactctacacaatgagtgaaaaaggctagggccaaataaagagctcag 417
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcttagtaaactctacacaatgagtgaaaaaggctagggccaaataaagagctcag 617


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space:   329664
Effective search space used:   329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)