CTCACTATATCCAGAGGATCCGCGGAATTCAGCATAGCTACACACTATTG
GCTTATTCAAACATCAGCAGAAAATTTACATGTATGTGCAGGGTGTCAGA
GTTCTGTGAGTTGTTGACTCAGTTCAGATATGTTATGTCCTCACATTCCT
CTTTATCTTATGGTCAAGATGTTCCCAGGAATGTTTTAACAACAGGGCAT
ACCCAGGTTTGTTTTTCTTTTTTCTCAGCCCCAGGCAGCCTCTAGCTCAC
AAACAACCAGCAATTTCTGAGTACTTTATATGACTTACAGGTATTGAAAT
TTCATCTTTCTTTCATGGGCAGTACTCCCCCAGCCAGTATGAGAAGTCTT
CTGGAAGTCCCTCTGTCTGGTGGTCAGAGACATCTTCAGGACATTCCACA
GGCTGGTAACAAAGGCTGAATGGTGTCTCCCAAAAGACAAGTGGAGACAG
GGGTAGTCCTGGATCAATATGAAGTCTTTGAAGCTAGGCATTTGCACTTT
GAAGAACACCCAGAACTGTCACATGCCTATCTGCAGGCAAAGCAGGAAGG
ACCCTTAGGGAACACAGCCCCATGTCTTCAATCCCACAATTCTGGACTCA
GAAGTGGCTAGTAGGTACATGCCTGCAGTCACTTTTGTTTTGGTCAGACT
GAAGACACATTCAAGGGTTCCCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTCACCTGAGGAATATCGAATGGCTGAGAAGCACCTGAAAAA
ATGTTCAGCATTCTTAATCATCAGGGAAATGCAAATCAAAACAGCCCTGA
GATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGAC
AGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTG
GTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTGGTAGTTCC
TCAGAAAATTGGACCTCGTACTACCGGAAGATCCATCAATACCTCTCCTG
GGCATATACCCAGAAGATGTTCCAACTTGTAATTAGGACACATGTTCCAC
TATGTTCATAGCAGCATTATTTATAATAGCCAGAAGCTGGAAAGAACCCA
GATGTCCCTCAACAAAGGAATGGATACAGAAAATGTGGAACATTTACACA
ATGGAGTACTACTTAGTAATTAAAAACAATAAATTCATGAAATTCTTAGG
CAAATGGATGGATCTGGAGGATATCATCCTGCGTGAGGTAACCCAATCAC
AAAAGAACACACATAATATGCACTCACTGATAAGCAGATATTAACCCAGA
AACTTAGAATACTGAAGATCAATTTGCAAAATAAGTGAAACCCAAGAAAN

Query= MSMg01no501_a22.b1 MSMg01no501_a22.b1 CHROMAT_FILE:
MSMg01no501_a22.b1 PHD_FILE: MSMg01no501_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:49 2005
         (624 letters)



>mm_chr5_30041690_30042712
          Length = 1023

 Score =  992 bits (513), Expect = 0.0
 Identities = 522/525 (99%), Gaps = 1/525 (0%)
 Strand = Plus / Minus

                                                                        
Query: 100  gactcagttcagatatgttatgtcctcacattcctctttatcttatggtcaagatgttcc 159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 gactcagttcagatatgttatgtcctcacattcctctttatcttatggtcaagatgttcc 964

                                                                        
Query: 160  caggaatgttttaacaacagggcatacccaggtttgtttttcttttttctcagccccagg 219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963  caggaatgttttaacaacagggcatacccaggtttgtttttcttttttctcagccccagg 904

                                                                        
Query: 220  cagcctctagctcacaaacaaccagcaatttctgagtactttatatgacttacaggtatt 279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903  cagcctctagctcacaaacaaccagcaatttctgagtactttatatgacttacaggtatt 844

                                                                        
Query: 280  gaaatttcatctttctttcatgggcagtactcccccagccagtatgagaagtcttctgga 339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843  gaaatttcatctttctttcatgggcagtactcccccagccagtatgagaagtcttctgga 784

                                                                        
Query: 340  agtccctctgtctggtggtcagagacatcttcaggacattccacaggctggtaacaaagg 399
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783  agtccctctgtctggtagtcagagacatcttcaggacattccacaggctggtaacaaagg 724

                                                                        
Query: 400  ctgaatggtgtctcccaaaagacaagtggagacaggggtagtcctggatcaatatgaagt 459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723  ctgaatggtgtctcccaaaagacaagtggagacaggggtagtcctggatcaatatgaagt 664

                                                                        
Query: 460  ctttgaagctaggcatttgcactttgaagaacacccagaactgtcacatgcctatctgca 519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663  ctttgaagctaggcatttgcactttgaagaacacccagaactgtcacatgcctatctgca 604

                                                                        
Query: 520  ggcaaagcaggaaggacccttagggaacacagccccatgtcttcaatcccacaattctgg 579
            ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 603  ggc-aagcaggaaggacccttagggaacacagccccatgtcctcaatcccacaattctgg 545

                                                         
Query: 580  actcagaagtggctagtaggtacatgcctgcagtcacttttgttt 624
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544  actcagaagtggctagtaggtacatgcctgcagtcacttttgttt 500


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1023
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1013
Effective search space:   621982
Effective search space used:   621982
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)