XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTG
TTCTCCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTC
CACCTTCTTGAGTTATTTATATATGTTGGATATTAGTCCCCTATCTGATT
TAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGGCTTTTTGTCTTA
TTGACGGTGTATTTTGCCTTGCAGAAACTTTGGAGTTTCATTAAGTCCCA
TTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGA
ATTTTTCCCCTGTGACCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCT
ATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGA
TTTGACCTTAGTACAAGGAGATAAGTATGAATCAATTCGCATTCTTCTAC
ACGATAACAACCAGTTGTGCCAGTACCAATTGTTGAAAATGCTGTCTTTC
TTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGT
GTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTC
TGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTAA
AGCTTCAGGTCAGGCATGGTGATTCCACCTGAGGTTCTTTTATCCTTGAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAAAA
AATGTTCAACATCCTTAATCATCAGGGAACTGCAAATCAAAACAACCCTG
TGATTCCACCTCACACCAGTTAGAATGGCTAAGATCAAAAATTCAGGTGA
CGGCAGATGCTGGGGAGGATGTGGAGAAAGAGGAACACTCCTTCATTGTT
GGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTC
CTCATAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCT
GGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAAGCTTTTTTTTTTT
TTTAATCTTACATTGTTTTATATATGAGTTTGCTTTTATTGTTGAGGACA
TTAAGTTTTAGCAACATAATGTGGTTGTTAGTGGATGTCTAAATGTGTTA
GTTCAACAAAAATAAGTATCTATTCTGGTAAAATAGCTTGCAGTTATCTG
TTACTCAAATAATAGAAAATGATGTATTTTAGACAGCATTTTGAATTAAA
GTGAGATCTTGTAATAGAATCATTCTTGACTGGTTATGCTCGTTATGGAC
ATTTAACGTATTCAGAAAGGAACAATATCAAGCACATG

Query= MSMg01no501_b17.g1 MSMg01no501_b17.g1 CHROMAT_FILE:
MSMg01no501_b17.g1 PHD_FILE: MSMg01no501_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:53 2005
         (603 letters)



>mm_chr5_82840253_82841255
          Length = 1003

 Score = 1044 bits (540), Expect = 0.0
 Identities = 589/608 (96%), Gaps = 5/608 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcacctgaggaataccgaatggctgagaagcacctgaaaaaaatgttcaacatccttaat 60
           ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 196 tcacctgaggaataccgaatggcagagaagcacctgaaaaaaatgttcagcatccttaat 255

                                                                       
Query: 61  catcagggaactgcaaatcaaaacaaccctgtgattccacctcacaccagttagaatggc 120
           |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 256 catcagggaaatgcaaatcaaaacaaccctgggattccacctcacaccagtcagaatggc 315

                                                                       
Query: 121 taagatcaaaaattcaggtgacggcagatgctggggaggatgtggagaaagaggaacact 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 316 taagatcaaaaattcaggtgacagcagatgctggggaggatgtggagaaagaggaacact 375

                                                                       
Query: 181 ccttcattgttggtgggattgcaagcttgtacaaccactctggaaatcagtctggcggtt 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 376 ccttcattgttggtgggattgcaagcttgtacaaccactctggaaatcagtctggcagtt 435

                                                                       
Query: 241 cctcataaaattggacatagtactaccggaggatccagcaatacctctcctgggcatata 300
           ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 436 cctcagaaaattggacatagtactactggaggatccagcaatacctctcctgggcatata 495

                                                                       
Query: 301 tccagaagatgtcccaaccggtaagaaagctttttttttttttt-----aatcttacatt 355
           ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||
Sbjct: 496 tccagaagatgtcccaaccggtaagaaagctttttttttttttttttttaatcttacatt 555

                                                                       
Query: 356 gttttatatatgagtttgcttttattgttgaggacattaagttttagcaacataatgtgg 415
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 556 gttttatatatgagtttgcttttattgttgagaacattaagttttagcaacataatgtgg 615

                                                                       
Query: 416 ttgttagtggatgtctaaatgtgttagttcaacaaaaataagtatctattctggtaaaat 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttgttagtggatgtctaaatgtgttagttcaacaaaaataagtatctattctggtaaaat 675

                                                                       
Query: 476 agcttgcagttatctgttactcaaataatagaaaatgatgtattttagacagcattttga 535
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 676 agcttgcagttaactgttactcaaataatagaaaatgatgtattttagacagcatttgga 735

                                                                       
Query: 536 attaaagtgagatcttgtaatagaatcattcttgactggttatgctcgttatggacattt 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 736 attaaagtgagatcttgtaatagaatcattcttgactggttatgctcgttatggaaatat 795

                   
Query: 596 aacgtatt 603
           ||||||||
Sbjct: 796 aacgtatt 803


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)