XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTGA
GACTATCAGTTACCTACGCCTTATCTCCTCATTTATTTATCCTTCCATCT
ATGCTGTTATGTCTGACCAACTTTATTTTGCTTGAGTTCATATTTGTGTT
TAAGTGCTTAATTAGGCTTCTGACTCCTTAAACACTGGAATCACTACACA
CACACACACACACACACACACACACACACACACACACACACACACACACA
CACACACACACTTAATGTGGATGGAAAGGGCCTTATATGTAGTCCAAGGT
GGATGCTTGCAAACCTCAGCCCTTCAAATGCTGGGATTATAGGTGTGGTC
CAGCAGATGCAGTTATTCCTTGTATCTTTATATCTCCTGTTCAATATCTT
GAATATACTGGATTCTTCTTTCATTCATTGGTTGAATGTTTCTTTGTCGA
GTATGTGTATTGTGTAATACACTGTAATAATTCTGCAAAAGAGAAAGGAA
AAAAGAAAAAAGATACAGTCTTTAGACCATCCACTGCTTGCACAGGTTGC
CTTTTCCAGCCCCCACTGCAGTTGCCTTGTTCTGGGTAACAGACTGAGGA
CGTGCAATCTGGCTTTGATAGCTGGGAGGTTTTGTAACTCCCACTCTCTC
TCACTTGGATCTGGCAACCTCAGAAACACTGAAATAAATGATAATGTCAC
AACATGTAGTCTGAGGTATTGACTCACT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAAT
GCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGA
TTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAG
CAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGT
GGGATTGCAGGCTTGTACAACCACTCTGGAGATCAGTCTGGCGGTTCCTC
AGAAAACTGGATATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGG
CATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTA
TGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAGGAACCCAGA
TGCCCCTCAACAGAGGAATGGATACAGAAGATGTGGTACATCTACACAAT
GGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTGGCCA
AATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAA
AGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAAC
CTAAGATACCCAAGATATNAGATACAATTTTCCTAACACATGAAACTCTA
GAAAATTGAGACTGGAGG

Query= MSMg01no501_l19.b1 MSMg01no501_l19.b1 CHROMAT_FILE:
MSMg01no501_l19.b1 PHD_FILE: MSMg01no501_l19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:37 2005
         (633 letters)



>mm_chr5_78091543_78092575
          Length = 1033

 Score = 1112 bits (575), Expect = 0.0
 Identities = 613/629 (97%), Gaps = 6/629 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctgagactatcagttacctacgccttatctcctcatttatttatccttccatc 64
           |||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaatcctctgagacaatgagttacctatgccttatctcctcatttatttatccttccatc 264

                                                                       
Query: 65  tatgctgttatgtctgaccaactttattttgcttgagttcatatttgtgtttaagtgctt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatgctgttatgtctgaccaactttattttgcttgagttcatatttgtgtttaagtgctt 324

                                                                       
Query: 125 aattaggcttctgactccttaaacactggaatcactacacacacacacacacacacacac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aattaggcttctgactccttaaacactggaatcactacacacacacacacacacacacac 384

                                                                       
Query: 185 acacacacacacacacacacacacacacacacacacacacacttaatgtggatggaaagg 244
           ||||||||||||||||||||||||||||||||||||      ||||||||||||||||||
Sbjct: 385 acacacacacacacacacacacacacacacacacac------ttaatgtggatggaaagg 438

                                                                       
Query: 245 gccttatatgtagtccaaggtggatgcttgcaaacctcagcccttcaaatgctgggatta 304
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gcctcatatgtagtccaaggtggatgcttgcaaacctcagcccttcaaatgctgggatta 498

                                                                       
Query: 305 taggtgtggtccagcagatgcagttattccttgtatctttatatctcctgttcaatatct 364
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 499 taggtgtggtccagcagatgcggttattccttgtatctttatatctcctgttcaatatct 558

                                                                       
Query: 365 tgaatatactggattcttctttcattcattggttgaatgtttctttgtcgagtatgtgta 424
           |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 559 tgaacatactggattcttctttcattcattggttgaatgtttctttgttgagtatgtgta 618

                                                                       
Query: 425 ttgtgtaatacactgtaataattctgcaaaagagaaaggaaaaaagaaaaaagatacagt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttgtgtaatacactgtaataattctgcaaaagagaaaggaaaaaagaaaaaagatacagt 678

                                                                       
Query: 485 ctttagaccatccactgcttgcacaggttgccttttccagcccccactgcagttgccttg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ctttagaccatccactgcttgcacaggttgccttttccagcccccactgcagttgccttg 738

                                                                       
Query: 545 ttctgggtaacagactgaggacgtgcaatctggctttgatagctgggaggttttgtaact 604
           ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 739 ttctgggtaactgactgaggacgtgcaatctggctttgatagctgggaggttgtgtaact 798

                                        
Query: 605 cccactctctctcacttggatctggcaac 633
           |||||||||||||||||||||||||||||
Sbjct: 799 cccactctctctcacttggatctggcaac 827


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 91
Number of extensions: 36
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)