CACTCCTATTTCCAANGATCCNCGGATTCTTCCTATCTCTANNGTGCTGG
GTTATCTTATNGATATAGTCTTTTGCTTTCANAAACTTTTTCGGTTTCTC
GAGGGCCCCTTTATAAATTTTTGAACCTTAAACCATAACCCATTGTATTT
CTGTTTACCAAATTTCCCCCTGTGCCAATAAATTTAAGGCTCCTTCCCAC
TCCCTCTTCTCTTCAATTTAAAANNCACGGGNTGTCTTGCTTGTTTTATT
TTAAGGTTCTTTGATCCACTTGCACTTGACTTTTTCTAGNTTCTAANNGN
CAATTATAAACAAAAAANGGGTTTTATTTTTNCTTTTTTCCCCCCNNTTT
CCCCCCCCCCCTTTNNNNNNNAAAAAGGGTGGGCCAGGGTTTAACAAATG
ATTCTTTTCTTTAATCCACCAAAAAGGGTTCACTCCAACAATCTCTTAAA
AAGNTTCCTCTTAAAAAAACTTAATCTTAAAAAAAAAAAATTTTTTTTTT
AAAAAAACACCGCCCCATGATCCAGGGNNNCNNNNTNNNNCCCCCCCCCT
CCCCCCCCCCNANNNNNNNNNAAAATAATANNTTACTTGTCAGGTTTTTT
CTTAGGGNNNNNANNNNNNNNNNNNNNTTGGGGGGGGGGGGGCCCCGGAA
CCGGGNAAAAAATTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNANAANNNANANNNNTNNANNNANNAANNNNANNNNNNNNNNAAAAN
NNNNAANANNNNNNNNNANAAAAAANANAANNNNNNNNNNNNNNNNAAAA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAANAAANNANAAAAAAAAA
AAAAGAGAGGCAGAGAGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCTTAGTTCCTGTACACTCTATAATTTGCAGCAAATTATGG
AGTTGGCTATCTCATTGACTTCTAGTCGAAGAGGTTCATCGTTCATTGGT
CTCTGGTATCTTGGCAAACACAATACATGCATTTTTGTCATTCTAACCTC
ACCCAGTGTTTCGTGAAGCCTGGATACAATCAATACTCTAACACTGTGAC
AGGTATTAACTCTGCTGTGTACCTAGTATGGAGGGACAGTGGTTGAACTC
AGCTGTCAATAAAAAAAATTATTCAAGTGTTGAAATTTGACCCAGTTTGG
GAAGAGACTATCACATAACTTCTTGAAGTTAGAAGGGCTGACTTCTGATG
AGCAACAACAAACTAAACACATTACATTTGTCAGTTTTTCTTTGCTGTGA
CACATACCTGAGAGGAAGAATTTGAACAAAGGAAGGAACTATCTGATTTA
TTTCTACCTACAGTTTCAAAGGTTTTATTCAACTTTTGTTGGATTAGTTG
CTTTAGAGCTAAGAAAAAGTAGAGATTAGGGTAGCAAGAGGATATATGGT
CAATGGGCTTTTCACCTCATAGTGCCAGGTGAAGGGACACACACACATAC
ACAGAGCAGGGCAGGGGAGGGGGTGGG

Query= MSMg01no502_b03.g1 MSMg01no502_b03.g1 CHROMAT_FILE:
MSMg01no502_b03.g1 PHD_FILE: MSMg01no502_b03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:01 2005
         (555 letters)



>mm_chr5_8676420_8677374
          Length = 955

 Score = 1065 bits (551), Expect = 0.0
 Identities = 554/555 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttagttcctgtacactctataatttgcagcaaattatggagttggctatctcattgact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttagttcctgtacactctataatttgcagcaaattatggagttggctatctcattgact 260

                                                                       
Query: 61  tctagtcgaagaggttcatcgttcattggtctctggtatcttggcaaacacaatacatgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctagtcgaagaggttcatcgttcattggtctctggtatcttggcaaacacaatacatgc 320

                                                                       
Query: 121 atttttgtcattctaacctcacccagtgtttcgtgaagcctggatacaatcaatactcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttttgtcattctaacctcacccagtgtttcgtgaagcctggatacaatcaatactcta 380

                                                                       
Query: 181 acactgtgacaggtattaactctgctgtgtacctagtatggagggacagtggttgaactc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acactgtgacaggtattaactctgctgtgtacctagtatggagggacagtggttgaactc 440

                                                                       
Query: 241 agctgtcaataaaaaaaattattcaagtgttgaaatttgacccagtttgggaagagacta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctgtcaataaaaaaaattattcaagtgttgaaatttgacccagtttgggaagagacta 500

                                                                       
Query: 301 tcacataacttcttgaagttagaagggctgacttctgatgagcaacaacaaactaaacac 360
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcacataacttcttgaagatagaagggctgacttctgatgagcaacaacaaactaaacac 560

                                                                       
Query: 361 attacatttgtcagtttttctttgctgtgacacatacctgagaggaagaatttgaacaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attacatttgtcagtttttctttgctgtgacacatacctgagaggaagaatttgaacaaa 620

                                                                       
Query: 421 ggaaggaactatctgatttatttctacctacagtttcaaaggttttattcaacttttgtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaaggaactatctgatttatttctacctacagtttcaaaggttttattcaacttttgtt 680

                                                                       
Query: 481 ggattagttgctttagagctaagaaaaagtagagattagggtagcaagaggatatatggt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggattagttgctttagagctaagaaaaagtagagattagggtagcaagaggatatatggt 740

                          
Query: 541 caatgggcttttcac 555
           |||||||||||||||
Sbjct: 741 caatgggcttttcac 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)