XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCCTT
TATGTCTCAGACTATAAGCTAATACTGAGGATAAAGGAGGGGCATACTAT
TTTGCGTGCTACATTTCTTTCTAAATAATCATTCAAGAAAGTATAACAAA
ATATCTTTGCCTTTTCAATCGAGTGGTATATGATGAATGTCTAAGCTTCT
ATTGGAAATGCATATTTGCATATTTGAATTACTTCAACATTAATACAGTC
AAAAGGAATGAACAAACTGTGCCAAATTTTTCAGAAATCCAAGAGTGTAA
GAAATGAAAAATATTTCTTGGATATAATAACTTTTAAAGAGAATTTGTAA
GACAATTGCAGTGAAACAGTCATGGTTAAAAGAGAGATGCCCATGGGCCA
AAGGATAGGATGGAAAACTGACCAGAATGTGGGAAATGAAAAGTAGGAAG
ACCCAACAAATTTTGCTCTTTAAAAAAGGGAACAAAAATGTATTTAAAGG
TTGGTTAATATAGAGGAAAACCATATCAGAGTAATACTCCCAACATGGCA
AGAAGAGCCTGAGAAGGCAAATGGCTACATCATCAAGGAAAGGACTTGGG
CCTTCCTTTGTTGTAGTCCAGTAGAGAATAAATAAAGGATTAAAATTATT
TTCAGTAGGATATAGAGACCAGAGATATAAGGGCCATCTTCTGGAGGAGG
AGACATGGCTCCATAGACAAGAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXAGTCACCACTCGAAACCGCACAGATCAGTCAGGAATGGAGT
GGAGTGGGAGGTTATCCGTGGGCCTGTGATGAGGAGCCCAGGGCTGGGGA
CTCCCAAACTCCTGGACATCCAGGTGCTGTGGAGAGAGGAGTAGGGAACA
GAAGAGGCTCATGGGCTGAATGAGCCTGGGGCCCTGGGGTAGGTCGAACT
CCGGCTTAGCTCATCTGGGATTGTCTTTAGCTTAGCTGCAATTGTCTGGG
ACCATGGAGGGGCCTTCTTTGGGAGACTTAGGCAGCATGGCTCTGTAGCC
ATATGTTTTCTCCATGCTCCCCATGGCAGTCCTTGACAAAAGAGAAAGTT
CATGCTTATCCATATTGTTTATTGACTGTTCATTGTGGAAAATGAGTGCA
TACCATCTCCTCAGGGTGGACCAGAGATTACCTTTTGCAGGAAGAAATGT
CTGGAGGAAGAAGCTTATTGGACAAACTCTCAGAGCCCATCTAGATACCT
CATTAGCATGGAGCACTCTGTTCTGATCTATATGACCATAGGTCACATTC
TTTTATAGGAAGTGTGGTCATGTGACAGGAGCCTGGAAGTAAGCAGGCCT
ACTGTCCTCTCTGAGTTCCATGGTTTCCAACCAACTAAATCTTA

Query= MSMg01no502_c05.b1 MSMg01no502_c05.b1 CHROMAT_FILE:
MSMg01no502_c05.b1 PHD_FILE: MSMg01no502_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:06 2005
         (647 letters)



>mm_chr5_98302841_98303886
          Length = 1046

 Score = 1212 bits (627), Expect = 0.0
 Identities = 639/643 (99%), Gaps = 1/643 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcctttatgtctcagactataagctaatactgaggataaaggaggggcatacta 64
           ||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 846 gaattctccttta-gtttcagactataagctaatactgaagataaaggaggggcatacta 788

                                                                       
Query: 65  ttttgcgtgctacatttctttctaaataatcattcaagaaagtataacaaaatatctttg 124
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ttttccgtgctacatttctttctaaataatcattcaagaaagtataacaaaatatctttg 728

                                                                       
Query: 125 ccttttcaatcgagtggtatatgatgaatgtctaagcttctattggaaatgcatatttgc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ccttttcaatcgagtggtatatgatgaatgtctaagcttctattggaaatgcatatttgc 668

                                                                       
Query: 185 atatttgaattacttcaacattaatacagtcaaaaggaatgaacaaactgtgccaaattt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 atatttgaattacttcaacattaatacagtcaaaaggaatgaacaaactgtgccaaattt 608

                                                                       
Query: 245 ttcagaaatccaagagtgtaagaaatgaaaaatatttcttggatataataacttttaaag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ttcagaaatccaagagtgtaagaaatgaaaaatatttcttggatataataacttttaaag 548

                                                                       
Query: 305 agaatttgtaagacaattgcagtgaaacagtcatggttaaaagagagatgcccatgggcc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agaatttgtaagacaattgcagtgaaacagtcatggttaaaagagagatgcccatgggcc 488

                                                                       
Query: 365 aaaggataggatggaaaactgaccagaatgtgggaaatgaaaagtaggaagacccaacaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aaaggataggatggaaaactgaccagaatgtgggaaatgaaaagtaggaagacccaacaa 428

                                                                       
Query: 425 attttgctctttaaaaaagggaacaaaaatgtatttaaaggttggttaatatagaggaaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 attttgctctttaaaaaagggaacaaaaatgtatttaaaggttggttaatatagaggaaa 368

                                                                       
Query: 485 accatatcagagtaatactcccaacatggcaagaagagcctgagaaggcaaatggctaca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 accatatcagagtaatactcccaacatggcaagaagagcctgagaaggcaaatggctaca 308

                                                                       
Query: 545 tcatcaaggaaaggacttgggccttcctttgttgtagtccagtagagaataaataaagga 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tcatcaaggaaaggacttgggccttcctttgttgtagtccagtagagaataaataaagga 248

                                                      
Query: 605 ttaaaattattttcagtaggatatagagaccagagatataagg 647
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttaaaattattttcagtaggatatagagaccagagatataagg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1046
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1036
Effective search space:   659932
Effective search space used:   659932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)