Query= MSMg01no502_n21.b1 MSMg01no502_n21.b1 CHROMAT_FILE:
MSMg01no502_n21.b1 PHD_FILE: MSMg01no502_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:00 2005
(653 letters)
>mm_chr5_68614209_68615261
Length = 1053
Score = 1083 bits (560), Expect = 0.0
Identities = 611/630 (96%), Gaps = 5/630 (0%)
Strand = Plus / Minus
Query: 24 aattccaaatcccatcatggaggagcatgctcacagtgacaaagtttgagttaagtcaca 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 aattccaaatcccatcatggaggagcatgctcacagtgacaaagtttgagttaagtcaca 994
Query: 84 tggtcccagccaaggcttgctttgattgtaataacataagcaagtgtcatttccatgatc 143
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 993 tggtcccagccaaggcttgctttgattataataacataagcaagtgtcatttccatgatc 934
Query: 144 tacttactgccaatttttcacattcctgtgcttgttctgtatgtcttgattatcaaggtc 203
|||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 933 tacttagtgccaatttttctcattcctgtgcttgttctgtgtgtcttgattatcaaggtc 874
Query: 204 cccaaacacagtgcctaagagctcttactgctctcagacagaagtctggatatgtctctc 263
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 873 cccaaacacagtgccaaagagctcttactgctctcacacagaagtctggatatgtctctc 814
Query: 264 agagaaaatgggcatgttacatgagtctctttgacataggagttagagttattttaactg 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 agagaaaatgggcatgttacatgagtctctttgacataggagttagagttattttaactg 754
Query: 324 tgcattctcttttggtgaactagtatacatgctgcaaacggcatgttatgtggggggagg 383
|||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 753 tgcattctctgttggtgaactagtatacatgctgcaaacagcatgtaatgtggggggagg 694
Query: 384 ggaatgggctgttgaaaatgctttgacaagaggctaatagaaacttaaccctatgttctc 443
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 agaatgggctgttgaaaatgctttgacaagaggctaatagaaacttaaccctatgttctc 634
Query: 444 cattagaagctttggcttcatttttgctaattggttactcatgaactttgaacgatcata 503
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cattagaaactttggcttcatttttgctaattggttactcatgaactttgaacgatcata 574
Query: 504 attactgtgagtaacaagagtcaagtctgtgttagttgattaattaattaattaattaat 563
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 573 attactgtgagtaacaagagtcaagtctgtgttacttgattaattaattaattaatta-- 516
Query: 564 tataaatagcagccacatgtttttcattttaaacctttttttttaaattaggtatttatt 623
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 515 --taaatagcagccacatgtttttcattttaaaccttttttta-aaattaggcatttatt 459
Query: 624 tcatttacatttccaatgctatcccaaaag 653
||||||||||||||||||||||||||||||
Sbjct: 458 tcatttacatttccaatgctatcccaaaag 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_n21.g1 MSMg01no502_n21.g1 CHROMAT_FILE:
MSMg01no502_n21.g1 PHD_FILE: MSMg01no502_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:00 2005
(561 letters)
>mm_chr5_68481903_68482863
Length = 961
Score = 1000 bits (517), Expect = 0.0
Identities = 546/561 (97%), Gaps = 10/561 (1%)
Strand = Plus / Plus
Query: 1 atgcagggtaggagtttggaggcaggagctgatgcagggaccatggaagggtgtggctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgcagggtaggagtttggaggcaggagctgatgcagggaccatggaagggtgtggctta 260
Query: 61 ctggactgcttcccctggcttgcatagcttgctttcttatagaacccaagactaccagcc 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggattgcttcccctggcttgcatagcttgctttcttatagaacccaagactaccagcc 320
Query: 121 caggaatcgcaccacccacaataggccctcccagccatgatcactaattgagaaaatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggaatcgcaccacccacaataggccctcccagccatgatcactaattgagaaaatgtc 380
Query: 181 ttacaactggatctcatgggggcatttcctcaagggaggctcatttctctgtaataactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttacaactggatctcatgggggcatttcctcaagggaggctcatttctctgtaataactc 440
Query: 241 cagcttgtgttttgttgacacacaaaatcagccagtacagacactaagcttattttaagg 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcttgtgtcaagttgacacacaaaatcagccagtacagacactaagcttattttaagg 500
Query: 301 aagagaagagatagaatagagtagggcatgcctgactgacaaggacacacaatcttcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagagaagagatagaatagagtagggcatgcctgactgacaaggacacacaatcttcttc 560
Query: 361 tctttaggccactagctttgcacctataatcattcctcctcccccccctcctcctcctcc 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 tctttaggccactagctttgcacctataatcattcctcc-cccccccctcctcctcctcc 619
Query: 421 tcctcctcctcctccttcttcttcgtattattagtacattgtagctatcttcagacacac 480
||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 620 tcctcct---------tcttcttcgtattattagtacattatagctatcttcagacacac 670
Query: 481 cagaagagggcattgaatcccattatagatggttgtgagccaccatgtggttgctgggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cagaagagggcattgaatcccattatagatggttgtgagccaccatgtggttgctgggaa 730
Query: 541 ttgaactcaggacctccagaa 561
|||||||||||||||||||||
Sbjct: 731 ttgaactcaggacctccagaa 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
