Query= MSMg01no504_b14.b1 MSMg01no504_b14.b1 CHROMAT_FILE:
MSMg01no504_b14.b1 PHD_FILE: MSMg01no504_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:35 2005
(632 letters)
>mm_chr5_77618524_77619555
Length = 1032
Score = 1129 bits (584), Expect = 0.0
Identities = 620/632 (98%), Gaps = 1/632 (0%)
Strand = Plus / Plus
Query: 1 tcaggggttataaaatcatcaagtcatctaaacagcattatttcctgaaagttcatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tcaggggttataaaatcatcaagtcatctaaacagcattatttcctgaaagttcatcttc 261
Query: 61 atgttgatctgcaagaaagttacccaacagagtagactatcacctaggaagtaatcacac 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atgttgatctgcaagaaacttacccaacagagtagactatcacctaggaagtaatcacac 321
Query: 121 cgggttataattagtgagggccttttcatgcccaatcacaggtttaagaagaatatagca 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cgg-ttataattagtgagggccttttcatgcccaatcacaggtttaagaagaatatagca 380
Query: 181 atgacaaatgtgagaaggcacattggcggcaagaagcaatcctgggacaaagcctctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgacaaatgtgagaaggcacattggcggcaagaagcaatcctgggacaaagcctctggg 440
Query: 241 gttgttcctctccttagtacacccacagcagccatgcacccatagcaaccatggacccat 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttgttcctctccaaagtacacccacagcagccatgcacccatagcaaccatggacccat 500
Query: 301 agcaaccatgcaaaagagtggactgtctccaggaagctcacttgcccagggcagcgcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcaaccatgcaaaagagtggactgtctccaggaagctcacttgcccagggcagcgcctc 560
Query: 361 ttgcatccaccaggtgttgcctaaactcagataatctgggctttatgagatgacctaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgcatccaccaggtgttgcctaaactcagataatctgggctttatgagatgacctaagt 620
Query: 421 gatttcagcttcagtagcctacccaaagaacacaggtgggaactgtatgaagcctctgaa 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 gatttcagcttcagtagcctacccaaagaacacaggtggaaactgtatgaagcctctgaa 680
Query: 481 ctagtccactccatgggaagaaagaaaggtttattggggatcgaactgccgaggcgatct 540
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 681 ctagtccacgccatgggaagaaagaaaggtttattgaggatcgaactgccgaggcgatct 740
Query: 541 ctttggggatcagagagacgcaagtagattttctgtggcagtcagtagggtggagatctt 600
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 741 ctttggggatcagagagacgcaagtagattttatgtgacagtcagtagggtggagatctt 800
Query: 601 tgaactgacgcagactgtacagactgagagaa 632
||| |||| |||||||||||| ||||||||||
Sbjct: 801 tgagctgatgcagactgtacacactgagagaa 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_b14.g1 MSMg01no504_b14.g1 CHROMAT_FILE:
MSMg01no504_b14.g1 PHD_FILE: MSMg01no504_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:35 2005
(319 letters)
>mm_chr5_77783107_77783825
Length = 719
Score = 617 bits (319), Expect = 0.0
Identities = 319/319 (100%)
Strand = Plus / Minus
Query: 1 acccagttctagtacagcagaccgatgacccagttctagtacagctatccctcgcagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 acccagttctagtacagcagaccgatgacccagttctagtacagctatccctcgcagctg 460
Query: 61 aaactttcgttaaagggaataatgggatgttgcctctaaattgtgcttcggaaagagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aaactttcgttaaagggaataatgggatgttgcctctaaattgtgcttcggaaagagatg 400
Query: 121 tggacggggagtcaggcatgtcaataacgtggtcggctacgtgttcatttaaaccttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tggacggggagtcaggcatgtcaataacgtggtcggctacgtgttcatttaaaccttccc 340
Query: 181 cctggcagctgaagttccccaatgcttatttgcggttagtggcttgtgaagagcatggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cctggcagctgaagttccccaatgcttatttgcggttagtggcttgtgaagagcatggcc 280
Query: 241 gatagttttcaaggaaaaccggcaagaagctttgttgcttctcaaggggtctccatggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gatagttttcaaggaaaaccggcaagaagctttgttgcttctcaaggggtctccatggaa 220
Query: 301 tttacaaaatgagaagcca 319
|||||||||||||||||||
Sbjct: 219 tttacaaaatgagaagcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
