Query= MSMg01no505_p06.b1 MSMg01no505_p06.b1 CHROMAT_FILE:
MSMg01no505_p06.b1 PHD_FILE: MSMg01no505_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:59 2005
(637 letters)
>mm_chr5_21427155_21428194
Length = 1040
Score = 1143 bits (591), Expect = 0.0
Identities = 627/641 (97%), Gaps = 5/641 (0%)
Strand = Plus / Plus
Query: 1 aggaaggaaaccactctgactggatgaatacttttggaggtctagacagtatttgagaaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 aggaaggaaaccactctgactggatgaatacttttggaggcctagacagtatttgagaaa 260
Query: 61 aactaagctttgtattatgtagttagtcacaaagactacattagaattctaatgtgttca 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 aactaagctttgtattatgtagttagtcacagagactacattagaattctaatgtgttca 320
Query: 121 gttgaacttaacctggcaaaagttaaggtatactataaagagattatttgaaaagctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gttgaacttaacctggcaaaagttaaggtatactataaagagattatttaaaaagctcag 380
Query: 181 attaagatgggcatggtggcatatactataatcccagtactctggagttaaggtgacctt 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attaaggtgggcatggtggcatatactataatcccagtactctggagttaaggtgacctt 440
Query: 241 ggctatatagcaagcttgagtagcctgggctacataagactgtgtcaacaatacaaaaca 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggctacatagcaagcttgagtagcctgggctacataagactgtgtcaacaatacaaaaca 500
Query: 301 tcagcaaaaaagaaactgattatctgtaaaatgctaagtttatctcattagtgttcttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagcaaaaaagaaactgattatctgtaaaatgctaagtttatctcattagtgttcttta 560
Query: 361 tacttaaatatttaggtatgtatagttaaatattcaagaaaagtattttttt----ggtt 416
||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 tacttgaatatttaggtatgtatagttaaatattcaagaaaagtatttttttttttggtt 620
Query: 417 atatcagcagcactgaggctgttttcttccttttctaaaatttaattttatttgtaattc 476
||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||
Sbjct: 621 atatcagcagcactgaggctgttttcttctttttttaaa-tttaattttatttgtaattc 679
Query: 477 attttttacaccccatattccattccctgcccctcccctcccaccctccaactgccccac 536
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 680 attttttacaccccatattccattccccgcccctcccctcccaccctccaactgccccac 739
Query: 537 atcccacacctcctccccaccacaccctgtatccacatggatgctcccatccccaacccc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atcccacacctcctccccaccacaccctgtatccacatggatgctcccatccccaacccc 799
Query: 597 acctgacctctaaactccctggggcctccagtctcttgagg 637
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 acctgacctctaaactccctggggcctccagtctcttgagg 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1040
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1030
Effective search space: 645810
Effective search space used: 645810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_p06.g1 MSMg01no505_p06.g1 CHROMAT_FILE:
MSMg01no505_p06.g1 PHD_FILE: MSMg01no505_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:59 2005
(652 letters)
>mm_chr5_21617710_21618761
Length = 1052
Score = 603 bits (312), Expect = e-176
Identities = 339/348 (97%)
Strand = Plus / Minus
Query: 305 atctgtgcaggccagacctgttcagagcaccagatgaggaaggatggttgtcatgccgac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 atctgtgcaggccagacctgttcagagcaccagatgaggaaggatggttgtcatgccgac 795
Query: 365 cgtcttagtgatgaaggttacccacaccagaaatgcaggagtacttgctgtgtctttact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 cgtcttagtgatgaaggttacccacaccagaaatgcaggagtacttgctgtgtctttact 735
Query: 425 ttcctggttgttgatttgtgtcaccaaagaatggtgttaaagcaagaacaaaggcgtagc 484
|||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 734 ttcccggttcttgatttgtgtcaccaaagagtggtgttaaagcaagaacaaaggtgtagc 675
Query: 485 attgtcattgtctcagtgcaagcttgaagacagtgcaagtttcagtctccatgctggtgg 544
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 674 attgtcattgtctcagtgcaagcttgaagacagcgcaagtttcagtctccatgctggtgg 615
Query: 545 acagaggctgtcctgcagaaagaggagctgcaatggtgactacaccatgatgctgctagt 604
|||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 614 acagaggctgtcctacagaaagaggagctataatggtgacaacaccatgatgctgctagt 555
Query: 605 acattcccaagagttaagtctggagaacatttatttcatttgataaat 652
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 acattcccaagagttaagtctggagaacatttatttcatttgataaat 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
