NACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATATTCATTTTTGGCACTGTTCTTAGTGACAGGAACTTGTGA
ATCTATAGGTAACTGATACTAGGGAAGGATCTAATAGGTGTTACCTGGTA
AGTGATATATATATATATATATATATATATATATATATATATATATATAT
ATATATATATATATACAAAATTTTGTCTATATATATATATAATCTCTTGC
TCATCATTATATAAGTCTCTCTATGTAGTGGGCAGTGATTAGCACAGAGA
CCTAAATCTTATCAAGGTATAGAGAATGTTTTTTTGTGAAATTTGCATCC
ATGAATGAAAACTACCTATCTTCTTAAAGCTCAGGGATTATTGTAGAAAA
GAGACTGGAAAGCTTGTAAACTCCAGAAAAGTTGATGATATAATCACATG
GGTTTTTTTGGGACACAACAGGTTGAGGGACATATGGTGTCATGGTGGTT
GAGACCAAATTCATGACTCATTCACAAGCTTAAGTCCTACCATAAGAGGG
GTGGTAGACCTGAAGTCCAACTCCTACTTGTGGAGCTAGTGGTAATTTAT
AGCATCTGAGAGAGGAATAGTTAATTTTATACAGGGCACGGCCTCTGGTA
AGTTGGCCATGTTCCAGTAGAGAACACACATTTGTAAATATAAAGGCAGC
ACATATAGAATTGATTGGTTTATTAAAGAAAAATGTTAGATACTTCN

NGGCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGAGAAGTACCTCTTTCTACA
AAAAATTTGAGTGAATGCTTAAAGCCTCAAGGATTTGGACCAGTTAGAAG
GTTGTCTGTCCAGAACTCAATAAGAATCTATCTTGGGATTTTGTTAGCCT
GCCTCATAATGCTACTCTGTGTGAAACATTTAAAAATTCTACAAGGTATT
AACTTAGAAAGATCCAACTTTTTCATGAATCAAAGGACTAATTGTATTCT
TAGATGGCACTCAAGGCCTCTAGTAAAGTTTTCCGTGTCTTGCCCACCCA
CCTGAAGTATAAATAAACATATTTGAGAATGTCTTGATTTATGGTTTCCT
TTGTCATATTACTATAAAAAGATAACTAAATTGCTCCCTAGTTGAAACAT
GCTATTTTTTGAGACCTAAATCTATCTTTCTGTGCTGTGGTCACTCATAT
TAGGATCTAAACTAAAACATATCTATATTTCTTTGAAGTGAGAGCTGTTT
TTTGATTGTTGTTTTGTTTTGTTTTTCATTTCCATTAAGATTTTTAATAC
TACTTTATTTTAAAACCTGATAATACTCCCGATGATGATCAGGACATCTC
TCTTATAATCTCATATCTAANAGGTAATCATTTCCTTCATTTAATGTTGC
TTGTAGGTATGTGATTTGAATACTGAATAGTTTTTAATTGTTAAATATTG
AA

Query= MSMg01no506_i23.g1 MSMg01no506_i23.g1 CHROMAT_FILE:
MSMg01no506_i23.g1 PHD_FILE: MSMg01no506_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:49 2005
         (617 letters)



>mm_chr5_60029333_60030349
          Length = 1017

 Score = 1166 bits (603), Expect = 0.0
 Identities = 614/618 (99%), Gaps = 2/618 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgagaagtacctctttctacaaaaaatttgagtgaatgcttaaagcctcaaggatttgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgagaagtacctctttctacaaaaaatttgagtgaatgcttaaagcctcaaggatttgg 260

                                                                       
Query: 61  accagttagaaggttgtctgtccagaactcaataagaatctatcttgggattttgttagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accagttagaaggttgtctgtccagaactcaataagaatctatcttgggattttgttagc 320

                                                                       
Query: 121 ctgcctcataatgctactctgtgtgaaacatttaaaaattctacaaggtattaacttaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgcctcataatgctactctgtgtgaaacatttaaaaattctacaaggtattaacttaga 380

                                                                       
Query: 181 aagatccaactttttcatgaatcaaaggactaattgtattcttagatggcactcaaggcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagatccaactttttcatgaatcaaaggactaattgtattcttagatggcactcaaggcc 440

                                                                       
Query: 241 tctagtaaagttttccgtgtcttgcccacccacctgaagtataaataaacatatttgaga 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctagtaaagttttccctgtcttgcccacccacctgaagtataaataaacatatttgaga 500

                                                                       
Query: 301 atgtcttgatttatggtttcctttgtcatattactataaaaagataactaaattgctccc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtcttgatttatggtttcctttgtcatattactataaaaagataactaaattgctccc 560

                                                                       
Query: 361 tagttgaaacatgctattttttgagacctaaatctatctttctgtgctgtggtcactcat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagttgaaacatgctattttttgagacctaaatctatctttctgtgctgtggtcactcat 620

                                                                       
Query: 421 attaggatctaaactaaaacatatctatatttctttgaagtgagagctgttttttgattg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attaggatctaaactaaaacatatctatatttctttgaagtgagagctgttttttgattg 680

                                                                       
Query: 481 ttgttttgttttg-tttttcatttccattaagatttttaatactactttattttaaaacc 539
           ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgttttgttttggttttt-atttccattaagatttttaatactactttattttaaaacc 739

                                                                       
Query: 540 tgataatactcccgatgatgatcaggacatctctcttataatctcatatctaanaggtaa 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 740 tgataatactcccgatgatgatcaggacatctctcttataatctcatatctaaaaggtaa 799

                             
Query: 600 tcatttccttcatttaat 617
           ||||||||||||||||||
Sbjct: 800 tcatttccttcatttaat 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)