NNNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAGAATG
GGCGGAATTCTCCCACTATTACTGAGTATAGGGCAATGTGTGCTTTGAGC
TTTACTAAAGTTTCTTTAATGAATGTGGCTACCCTTTCATTTGGAGCATA
GATATTCAGAATTGAGAGTTCATCTTGGAAGATTTTACCTTTGATGAGTA
TGAAGTGCCCCTCATTGTCTTTTTTAATAACTTTGGGTTGGAAGTCAATT
TTACTCAATATTAGAATGGCTACTCCAGCTTGTTTCTTGGGACCATTTGC
TTGGAAAATTGTTTTCCAGCCTTTCCCTCTGTTTTAGTGTCTGTCTTTTT
CCCTGAAGTGGGTTTCCTGTATGCAGCAAAATGTTGGGTCCTGTTTGTGT
AGTCAGTCTGTTAGTCTGTCTTTTTATTGGGGAATTGAGTCCATTGATAT
TAAGAGATATTAAGGAAAAGTAATTGTTGCTTCCTGTTATTTTTGTTGTT
AGAGTTGGGATTCTGTTCTTATGGTTGTCTTCTTTTAGATTTAGAAGGAT
TACTTTCTTGCTTTATCTAGAGCGTCATTTCCATCCTTGTGTTGGTGTTT
TCCCTTTATTATCCTTTGAAGGGCTGGGTTCATGGAAAGATACTGTGTGA
ATTTTGTCTTGTCATGGAATACCTGGGTTTCCTCCATCTATGGNAATTGA
GAGTTTTGTTGTGTATAGTAGCCTGGGCTGGCATTTGTGTTCTCTTNAGG
TCTGTATTACATCTGG

NAAAACCCGAGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGGTATGTATGTCTTG
TGAGACATGGTCTCTTCAGGCCCTGTGCAGACCATTGTCCCAAGAGTGAG
ATCCATCTGAGGAGTTACCTTTAGTCTCTGGAAACGTGTGGGTGTTTTAG
GCTCCTTGTCACACCATGGGGTAAAATCAGATGCCTTCTCCCAGGAGAGG
GTGGCAGCACTTGTCACTTAGCAGCACTGTCATGTGGCCGTTACATGTGC
AGGCTCTCTGTTCTCCTTCCTACTTAGAAGGGATTTCTCCATCTGCCCAT
GCACAGTTGCCTCCATCCAGCGCAGTCACAGTGTGCTGGCTGCTTTTGCA
GCGTGTGCCAGCACTGCTGAGACAACAGTGGGGACACAAGCTTCCTGGGC
TTGAATCTGGTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC
TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC
TTTTCTTTTCTTTTCTTTTCTTTTCTTTCCTCCCTCCCTTCCCCTCCCTC
CCTTCCCCTCCCTCCTTCCCTTCCCCTCCCTCCCTTTCCTCCCCTCCCTT
TCCTCCCCTCCCTCCCTCCCCCCCTCCCCTCTCTTTTTTCTTTTTTTCCA
AAACAGGGTTTCCCTGTGTAGNCCCTGGCTGTCCTGGAAACTCCTTCCAT
TAACCAGGCTGGGCTCGAACTCATAAATTTGGCCTG

Query= MSMg01no508_n21.g1 MSMg01no508_n21.g1 CHROMAT_FILE:
MSMg01no508_n21.g1 PHD_FILE: MSMg01no508_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:56 2005
         (587 letters)



>mm_chr5_23023508_23024494
          Length = 987

 Score = 1089 bits (563), Expect = 0.0
 Identities = 575/579 (99%), Gaps = 3/579 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tccggtatgtatgtcttgtgagacatggtctcttcaggccctgtgcagaccattgtccca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tccggtatgtatgtcttgtgagacatggtctcttcaggccctgtgcagaccattgtccca 519

                                                                       
Query: 61  agagtgagatccatctgaggagttacctttagtctctggaaacgtgtgggtgttttaggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 agagtgagatccatctgaggagttacctttagtctctggaaacgtgtgggtgttttaggc 459

                                                                       
Query: 121 tccttgtcacaccatggggtaaaatcagatgccttctcccaggagagggtggcagcactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tccttgtcacaccatggggtaaaatcagatgccttctcccaggagagggtggcagcactt 399

                                                                       
Query: 181 gtcacttagcagcactgtcatgtggccgttacatgtgcaggctctctgttctccttccta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gtcacttagcagcactgtcatgtggccgttacatgtgcaggctctctgttctccttccta 339

                                                                       
Query: 241 cttagaagggatttctccatctgcccatgcacagttgcctccatccagcgcagtcacagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cttagaagggatttctccatctgcccatgcacagttgcctccatccagcgcagtcacagt 279

                                                                       
Query: 301 gtgctggctgcttttgcagcgtgtgccagcactgctgagacaacagtggggacacaagct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gtgctggctgcttttgcagcgtgtgccagcactgctgagacaacagtggggacacaagct 219

                                                                       
Query: 361 tcctgggcttgaatctggttttcttttcttttcttttcttttcttttcttttcttttctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tcctgggcttgaatctggttttcttttcttttcttttcttttcttttcttttcttttctt 159

                                                                       
Query: 421 ttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttttctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttttctt 99

                                                                       
Query: 481 ttcttttcttttctttcctccctcccttcccctccctcccttcccctccctcc-ttccct 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 98  ttcttttcttttctttcctccctcccttcccctccctcccttcccctccctcccttccct 39

                                                  
Query: 540 tcccctccctccctttcctcccctccctttcct-cccct 577
           ||||||||||||||| ||||||||||||| ||| |||||
Sbjct: 38  tcccctccctcccttccctcccctccctt-ccttcccct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 168
Number of extensions: 38
Number of successful extensions: 38
Number of sequences better than 10.0: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)