ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAAGCCTAGCGTCAGCTCAAGGACTGCCTAGGACATTGGAACACT
GGTGAAGGCTAATCTAACTCAGCTATATGTCAAAATTAACCTTTAAAGGC
ACTTATAATAAAACAATATTGAAGGAAAGCACACAGACCCTTTCACTAAC
TAAAGCAAGGACAGATCTGGAGCATTCGTTTTTTGGATTAAGTTTCCATG
AACTTTTTGCCTTGGGACTGCATCCAAGCTTTTGGGCCTGTCACAGTCAC
TACTGGCGTGGGTGTGGCATATATGCTATAAAGACGGGTCTGACTAGATA
CTTTCGTGGATTCAATATGGAATTTGAGAGAATTAGAGCCTTGGAGTACC
ACCAAAGTCGTTTCCTTGAGAAATTTAAAGGGAGATGAGGATGTTTGCTC
TGGGTGAGAAAATCTACAATACAGCAGATTTCAACCCAAAATGTCAGAAC
TTTCATTTGTATTTGTATTGTGTCTGGGTGAGAAAATCTACAATACAGCA
GATTTCAACCCAAAATGTCAGAACTTTCATTTGTATTTGTATTGTGTCCA
TTTGATCTGTCTTTTGGTTTTGCTGAGCACATCAACCAAGTAGGCTTTCA
GTGGAGACATCCTGAAAAGACATAACTACAGCAACCATTAGTACTTATGG
TCATTTATGTGACAAAATTCCCTATGAAATGAGGAAACATACATGGGGGA
AAAA

NNCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGATTGTGTGCCCT
ATTTATATGACTTTATCACGAGCTATTATAATTATGGCTTCCGTTTCCTT
AGTCTCTAAAGGGAATTGATTAGAAAGTGGGGAAACATATGAGACTGATA
GTCATGGATTATTTTTTGTTTTTGTTTTTAATTTTAAACTGCTAGTTAAC
ATCCTCATTTGAGTTTCCTCTGCCAGAGTCACTTGGGAAACAAAAAATGC
TAGATCTGCTTTTCTAAGACACAATGTATTGAACAAAATACAGAGACATG
TTGTGGGAATGAGATGATGGGAGATGAATATATTTTTTTCTTTTAGGCAA
ATTAACTTGAGAGTTAGAGTTAAGACTACTCTATGATAAGATTTAAAACA
TACTGGGTTCCTAGCAGTCTGAAAAACCACAGGATGAAAAGAAAACAAAT
AACTGAACTTGTGAAATTCAGAATGTCATTTTATAGATTCAGAGAATTAT
TAGTTTTCAAAAGTAGTACTTTGATAAGAAGGAGAGCAGTGAAAATGTAA
ATGTCTACAAAATGATATCTAAAAAAAAAATAAAAAGGCTCTATGCTTTA
GTCTCAAAGCTTTTCTGCCAAGAAATAAATATGCTTTCTTTTACTGACAG
GCTTATCTTCATTTCTCTGAAGATTCCTTATGTAAACCNACNGACCCGGA
AAATCTCTCGCACAACAAACCAAGCAAAGCA

Query= MSMg01no509_e21.g1 MSMg01no509_e21.g1 CHROMAT_FILE:
MSMg01no509_e21.g1 PHD_FILE: MSMg01no509_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:30 2005
         (512 letters)



>mm_chr5_10031188_10032099
          Length = 912

 Score =  982 bits (508), Expect = 0.0
 Identities = 511/512 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcagattgtgtgccctatttatatgactttatcacgagctattataattatggcttccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagattgtgtgccctatttatatgactttatcacgagctattataattatggcttccg 260

                                                                       
Query: 61  tttccttagtctctaaagggaattgattagaaagtggggaaacatatgagactgatagtc 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 tttccttagtctctaaagggaattgattagaaagtggggaaacatatgagactgatagcc 320

                                                                       
Query: 121 atggattattttttgtttttgtttttaattttaaactgctagttaacatcctcatttgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggattattttttgtttttgtttttaattttaaactgctagttaacatcctcatttgag 380

                                                                       
Query: 181 tttcctctgccagagtcacttgggaaacaaaaaatgctagatctgcttttctaagacaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcctctgccagagtcacttgggaaacaaaaaatgctagatctgcttttctaagacaca 440

                                                                       
Query: 241 atgtattgaacaaaatacagagacatgttgtgggaatgagatgatgggagatgaatatat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtattgaacaaaatacagagacatgttgtgggaatgagatgatgggagatgaatatat 500

                                                                       
Query: 301 ttttttcttttaggcaaattaacttgagagttagagttaagactactctatgataagatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttttcttttaggcaaattaacttgagagttagagttaagactactctatgataagatt 560

                                                                       
Query: 361 taaaacatactgggttcctagcagtctgaaaaaccacaggatgaaaagaaaacaaataac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaaacatactgggttcctagcagtctgaaaaaccacaggatgaaaagaaaacaaataac 620

                                                                       
Query: 421 tgaacttgtgaaattcagaatgtcattttatagattcagagaattattagttttcaaaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgaacttgtgaaattcagaatgtcattttatagattcagagaattattagttttcaaaag 680

                                           
Query: 481 tagtactttgataagaaggagagcagtgaaaa 512
           ||||||||||||||||||||||||||||||||
Sbjct: 681 tagtactttgataagaaggagagcagtgaaaa 712


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space:   452804
Effective search space used:   452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)