Query= MSMg01no510_l15.b1 MSMg01no510_l15.b1 CHROMAT_FILE:
MSMg01no510_l15.b1 PHD_FILE: MSMg01no510_l15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:23 2005
(232 letters)
>mm_chr5_149967931_149968562
Length = 632
Score = 433 bits (224), Expect = e-126
Identities = 230/232 (99%)
Strand = Plus / Minus
Query: 1 ggagttaaacatgaatcaatagattaactgatttttaaaaacaattgcgaaagctggtgt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 432 ggagttaaacatgaatcaatagattaactgatttttaaaaacaattgtgaaagctggtgt 373
Query: 61 ctaacccgagtccaaaccacctgtggggtctgatgatttcagcacgatttccgaaatagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ctaacccgagtccaaaccacctgtggggtctgatgatttcagcacgatttccgaaatagt 313
Query: 121 cagtctgctctcacattgtctgtctaggaaaaaggattgcgagtgggtttggggctagaa 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cagtccgctctcacattgtctgtctaggaaaaaggattgcgagtgggtttggggctagaa 253
Query: 181 ccatgcaggtgtttgctgcctgggaatgcgcagcttgttttcctccatgagc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ccatgcaggtgtttgctgcctgggaatgcgcagcttgttttcctccatgagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no510_l15.g1 MSMg01no510_l15.g1 CHROMAT_FILE:
MSMg01no510_l15.g1 PHD_FILE: MSMg01no510_l15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:23 2005
(315 letters)
>mm_chr5_149808003_149808719
Length = 717
Score = 571 bits (295), Expect = e-167
Identities = 311/317 (98%), Gaps = 2/317 (0%)
Strand = Plus / Plus
Query: 1 ctcacggatgtgccagctgactcacggtgtggtggtttgaacaagaatgccgccccctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcacggatgtgccagctgactcacggtgtggtggtttgaacaagaatgccgccccctcc 260
Query: 61 ccccc--atcccaccccacccccacccccgaaaagctcatggatttgtcatggtgctttt 118
||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 cccccctatcccaccccacccccacccccgacaagctcatggatttgtcatggtgctttt 320
Query: 119 ggagttcaggaggtactgcctggatggggtaaatgtgtcactctgaaggggcttggaggg 178
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 ggagttcaggaggtactgcctggatggggtaagtgtgtcactctgaaggggcttggagga 380
Query: 179 tttaaagactccacgctgccgtttgcagctcactttgtctgctttgtgctgtgcctccag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaagactccacgctgccgtttgcagctcactttgtctgctttgtgctgtgcctccag 440
Query: 239 atgtgagcgcacagcttcttgctcctgcccctggggctctgcccccttctattggactct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtgagcgcacagcttcttgctcctgcccctggggctctgcccccttctattggactct 500
Query: 299 tgaatctgaagtccaaa 315
||||||||||| |||||
Sbjct: 501 tgaatctgaagcccaaa 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 717
Length adjustment: 9
Effective length of query: 306
Effective length of database: 708
Effective search space: 216648
Effective search space used: 216648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
