CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTTCTGGCTATTATAAATAAGGCTGCTATGAACCTAGTAGAGCATCTGT
CCTTATTACAAGTTGGAGCATCTTCTGGGTATGTGCCCAGGAATCATATA
CCTGGGTCATCGGGTAGTTATATGTCCAATTTTCTGAGGAACTGCCAAAC
TGACTTCCAGAGTGGTTGTACCAGCTTGCAATCCCACCAGCAATGGAAGA
GTGTTCTTCTTTCTCCACATCCTCACCAGTATCTGCTGTCACCTCAGTTT
TTTTATTGTAGCCATTCTTACCGGTGTAAGGTACCCAATCTGTTGGTTGC
CATTTTGTCTTATTGACAGTATCCTTTGCCTTACAGAAGCTTTGCCACTT
TATTAGGTCCCATTTGTCAATTCTTGATCTTAGAGCATAGGCTATTGGTG
TTCTGTTCAGGAAATTTTCCCCTGTACCAATGTGCTGGAGGCTTTCCCCC
ACTTTCTCCTCTATAAGTTTCAGTGTATCTGGTTTTATGTGGAGGTCCTT
GATCCACTTGGATTTTAGCTTTGTACAAGGATATAAGAATAGATGGATTT
ATATTCTTCTACATGCTAATTGCCAATTAAGCCAGCACCATTTATTGAAA
ATGCTGTCTATTTTTACATTGGATGGTTTTAGGTCCTTTGTCAAAATCAA
GTGACCATACGTGTGTGGGTTCATTTCTGGGTCTTCATTTCTATC

CGAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTATAAATCTATAAATAAATAAATA
AATAAATAAATAAATAAATAAATATGAAGTCTTAAAGATCAAAGTGTATT
TTAGATTCTTTTACTAATTTTTACTTTCTTTTCCAAGAATAGTTGTTTCT
TAAATAAATTATGAGGATATAAAATGTGTCTTTTCCTCTACAAAGTAAAG
ACAGTGAAGGGGTATTCTTTTCTGAGATGATAATGGCAATATAGAAAAAA
AACTTCCCCTTACAGATACAGGAAAGGTATCTGAAAGTCAATTACCCTGA
GACAAGATAGTGATGTGCAAGTTTTACAGAGTAGTTTTCACCAATTTGTT
GGCTAACATCTGAGATGTTATCATCAGCAGTGATACAGGCAGACAGCACA
GCTGTGTGACCTCCAAAGCTAATGACTTTAAAAACCAACTGAAAGCAACT
AGTTGTTTTTGCAAGCCTCTCTCCATAACTCCAGCATCATAGGAAGGTGA
GGGCGGGAGATAGGTTGTTTACAAAGCATCCTCCTAACAAATACATTCAT
TCACTTATTCATTAATCAATGTTTATTGAGTATGTGCGACAGCTAGCGTT
TCAACTACTGGCTATTGATTACAAAGTAGAAAAAATAATTTCCAGAAGTT
TTGTAGTAGAAAACTATAGACATATTTCGTAAGCTACATGTG

Query= MSMg01no511_l14.g1 MSMg01no511_l14.g1 CHROMAT_FILE:
MSMg01no511_l14.g1 PHD_FILE: MSMg01no511_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:40 2005
         (466 letters)



>mm_chr5_6584226_6585093
          Length = 868

 Score =  814 bits (421), Expect = 0.0
 Identities = 437/443 (98%), Gaps = 2/443 (0%)
 Strand = Plus / Minus

                                                                       
Query: 26  ataaataaataaataaataaatatgaagtcttaaagatcaaagtgtattttagattcttt 85
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ataaataaataaataaataaatatgaagtcttaaagatcaaagtgtattttagattcttt 632

                                                                       
Query: 86  tactaatttttactttcttttccaagaatagttgtttcttaaataaattatgaggatata 145
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tactaatttttagtttcttttccaagaatagttgtttcttaaataaattatgaggatata 572

                                                                       
Query: 146 aaatgtgtcttttcctctacaaagtaaagacagtgaaggggtattcttttctgagatgat 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaatgtgtcttttcctctacaaagtaaagacagtgaaggggtattcttttctgagatgat 512

                                                                       
Query: 206 aatggcaatatag--aaaaaaaacttccccttacagatacaggaaaggtatctgaaagtc 263
           |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 511 aatggcaatatagaaaaaaaaaacttgcccttacagatacaggaaaggtatctgaaagtc 452

                                                                       
Query: 264 aattaccctgagacaagatagtgatgtgcaagttttacagagtagttttcaccaatttgt 323
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 451 aattaccctgagacaagatagtgatgtgcaagttttacagagcagttttcaccaatttgt 392

                                                                       
Query: 324 tggctaacatctgagatgttatcatcagcagtgatacaggcagacagcacagctgtgtga 383
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 391 tggctaacatctgagatgttatcatcagcagtgatacaggcagacagcacagttgtgtga 332

                                                                       
Query: 384 cctccaaagctaatgactttaaaaaccaactgaaagcaactagttgtttttgcaagcctc 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cctccaaagctaatgactttaaaaaccaactgaaagcaactagttgtttttgcaagcctc 272

                                  
Query: 444 tctccataactccagcatcatag 466
           |||||||||||||||||||||||
Sbjct: 271 tctccataactccagcatcatag 249


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 868
Length adjustment: 10
Effective length of query: 456
Effective length of database: 858
Effective search space:   391248
Effective search space used:   391248
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)