XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
TTCATGCCCAATGAAAGCAATATTGCAGCAGCTGTTCAAGCAAAGGGAAC
CAGGCCTCTGTGTCCCCATAAACACGGACTGTGTGGGTGCGTGATCCTGT
AATGCAGGAGGCAGGAGGTTGGGTGTCAAACCTTTGTGGTTTTTAATTAT
CTTATTGATCTGTATCTGTTTCCGTGTGTGATCTTTGCCTGCATGTATCC
ACGATGAGCCAAGTGTTGGCAGTAGTTTTGTGAGGGCGGTAGTATTGAGA
GGTGAACATTTGTAGAGATGTCCATGTTCTCTTTCTCATGGAGCCATTAA
AGTAAGGGCCTATTGTAGTGAATTTGCCCCCTTCTGCCATGTAACAGCAT
GGTGTTATAGCTCACTTCTGCTCTAGCTTTCACCGTGTGAGCAGACATCA
GCAAGGTGTCTGAGAAACCTGATTCCAAATGCAGGAATCTGCTTCTCTCT
CTCTCTCTCTCCCCCTCTCTCTCTCTCTCTCCCTCCCTCCCTCTCTCCCT
CTATTTCTGAACCNATTTCTTAGTCTATAATACCTGTGTTGAAACATGCT
TGATTGTCTATAGTCTCATAACTTTATTCTGAAATTTTGATACGGGGTAG
AGGCCAGAAAATAATTATTACCTTTGCCCTTACTTTTTTTCCCCAGCTGG
AAGCGCCTTTCTTTTTTTCTAAGTAAGCTGGTTACTTTGG

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGC
ACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAA
ACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAA
TTCAGGTGACAGCAAATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCC
TCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTC
TGGCGGTTCCTCATAAAACTGGACATAGTACTACCGGAGGATCCAGCAAT
ACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACA
CATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGG
AAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTA
CATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGA
AATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA
ACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAAGTGGATA
TTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACA
CATGAAACTCAAGAAGAATGAAGACTGATATGTGGACACTAT

Query= MSMg01no512_a07.b1 MSMg01no512_a07.b1 CHROMAT_FILE:
MSMg01no512_a07.b1 PHD_FILE: MSMg01no512_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:02 2005
         (524 letters)



>mm_chr5_26798206_26799129
          Length = 924

 Score =  926 bits (479), Expect = 0.0
 Identities = 505/517 (97%), Gaps = 6/517 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttcatgcccaatgaaagcaatattgcagcagctgttcaagcaaagggaaccag 64
           ||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcaggagcaatgaaagcaatattgcagcagctgttcaagcaaagggaaccag 264

                                                                       
Query: 65  gcctctgtgtccccataaacacggactgtgtgggtgcgtgatcctgtaatgcaggaggca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcctctgtgtccccataaacacggactgtgtgggtgcgtgatcctgtaatgcaggaggca 324

                                                                       
Query: 125 ggaggttgggtgtcaaacctttgtggtttttaattatcttattgatctgtatctgtttcc 184
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaggctgggtgtcaaacctttgtggtttttaattatcttattgatctgtatctgtttcc 384

                                                                       
Query: 185 gtgtgtgatctttgcctgcatgtatccacgatgagccaagtgttggcagtagttttgtga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgtgtgatctttgcctgcatgtatccacgatgagccaagtgttggcagtagttttgtga 444

                                                                       
Query: 245 gggcggtagtattgagaggtgaacatttgtagagatgtccatgttctctttctcatggag 304
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 gggcggtagtattgagaggtgaacatttggagagatgtccatgttctctttctcatggag 504

                                                                       
Query: 305 ccattaaagtaagggcctattgtagtgaatttgcccccttctgccatgtaacagcatggt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccattaaagtaagggcctattgtagtgaatttgcccccttctgccatgtaacagcatggt 564

                                                                       
Query: 365 gttatagctcacttctgctctagctttcaccgtgtgagcagacatcagcaaggtgtctga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gttatagctcacttctgctctagctttcaccgtgtgagcagacatcagcaaggtgtctga 624

                                                                       
Query: 425 gaaacctgattccaaatgcaggaatctgcttctctctctctctctctccccctctctctc 484
           |||||||||||||||||||||||||||||||||||||||||| |||||      ||||||
Sbjct: 625 gaaacctgattccaaatgcaggaatctgcttctctctctctccctctc------tctctc 678

                                                
Query: 485 tctctctccctccctccctctctccctctatttctga 521
           |||||||||||||||||||||||||||||||||||||
Sbjct: 679 tctctctccctccctccctctctccctctatttctga 715


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space:   469796
Effective search space used:   469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)