GCGGCGCTATACGACTCACTATATTTCGAGGATCCGCGGAATTCCAGGAT
AGTCTGGACTACACAGGAAAACCCTGTTTGGAAACAAAAAGAAACAAAGT
AGCAGTCTCCCTCCCCTGTCACCGCTTTTAAATCAGAGTTCCTAGCCATG
GAAGTGAACAGGAAGCCCCCCCTCCCCCCCCCCAGTGCTCTGTGGTACTT
TTGTTTCTGTTGCTGTGATACAATGCCTTGACAAGAAAAACAGCATAGCA
GGAAAGTATTTCTTAGCCGACAGATCATTACAGTAGGGAAGTCAAGGTAG
GAACTGAAAACGGCTGGTTGCATCATAGCCACGGCCAGGAGCAGGAACCA
ATACATACATGCTTGCTTATGCTTAACTTAAACTTCTCTGCTCTTACACA
GCTCTGGACCCCTGCCTAAGGAATGGTACCACCCACACTGGGCTGGGGTT
TCGGCATCATTCAATTTATATGACCACACAGGCCAACTCAACGTAGACAG
TCTCTCACTGAGACTCTTCTTAGGTGATCTAAGGGGGTGAGAAGTTGACA
AAGCTAGCTATCCCAGACTCCAGGCCTGGCCCTGGGATAGGGAGTGGGGG
TCCTGGTCCTGCCTATAGCCCAGCTGAGACCTAGGCCAGGCATGAGAGCT
CAGATTTCAGTGACCTGCTGAAGGGCCCTGGGAGGAGAACAAGAGATTCA
CTGCTAGCAGGTGTTAAAGTCCCTATGGGTGGCCTTTGGGGAACCCTAGC
CAGCAGATTCAGGGGGA

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTTCATGAAATCTCACCCCTAGCTACCTATTGGCAGT
CGGTGTTTTCTGGGAGAGGGAGAGTCAGTTTTCTCCAAAGAGATGGGAGA
TAGATACAGGAGAATCCTAGCAGCTAACAGACCAGCTAGCCTGGAATTTT
CAGTGGCAAACGAGAGAATCTGTCTCAAATAAGGTGAAAGGCAAGGACTA
ATTCTGAGAGTTCTCTTCTGACCTACATACATACACCATGACACATAAGT
GCTCAAATGAACACACACACATACACACTACACAGATACACAACCTCAAA
AAATGAGATTTCTTTTTTGAATAGGGTTTTTATCCCAGCAATAGAAACCT
TAACTAAGACAATACCTAAGACTCAACACCTAAGATTGTGCTCTGTCCTC
CACACACATGTACTTGCTCCTGAAGACATATCTGCACACACACACACACA
CACACACACACACACACACACACACACAAGAAAATGGTAAGGTAAGACTG
TCTTCTTGGAGTTCTTAAGGATTATAAGTTAAAAAGGAGACACAGGGTCT
GTCATCCAATCAAACACACTCTCACCATCTGGATGGAACTTCTCCCCAGG
CCGATTGTTGGACATTCTTCACACCAAGGGACAAAGGGGCTATGTGGTCT
TCCTGGAGAGCCTGGAGTTTTACTATCCAGAACCTTACAAACTGGTGACT
GGGAAGGAACCCACCCGGAGATTCTCCACC

Query= MSMg01no514_b21.b1 MSMg01no514_b21.b1 CHROMAT_FILE:
MSMg01no514_b21.b1 PHD_FILE: MSMg01no514_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:53 2005
         (676 letters)



>mm_chr5_141208981_141210056
          Length = 1076

 Score = 1087 bits (562), Expect = 0.0
 Identities = 631/666 (94%), Gaps = 23/666 (3%)
 Strand = Plus / Plus

                                                                       
Query: 29  gaattccaggatagtctggactacacaggaaaaccctgtttggaaacaaa----aagaaa 84
           |||||||||||||| | || ||| ||||||||||||||||||||||||||    ||||||
Sbjct: 216 gaattccaggatagccagggctatacaggaaaaccctgtttggaaacaaataaaaagaaa 275

                                                                       
Query: 85  caaagtagcagtctccctcccctgtcaccgcttttaaatcagagttcctagccatggaag 144
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 276 caaagtagcagtctccctcccctgtcaccgcttttaaatcagagttcccagccatgggag 335

                                                                       
Query: 145 -tgaacaggaagccccccctccccccccccagtgctctgtggtacttttgtttctgttgc 203
            | ||||||||||||||||    ||||||||||||||||||||| |||||||||||||||
Sbjct: 336 ct-aacaggaagccccccc----cccccccagtgctctgtggtagttttgtttctgttgc 390

                                                                       
Query: 204 tgtgatacaatgccttgacaagaaaaacagcatagcaggaaagtatttcttagccgacag 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tgtgatacaatgccttgacaagaaaaacagcatagcaggaaagtatttcttagccgacag 450

                                                                       
Query: 264 -------------atcattacagtagggaagtcaaggtaggaactgaaaacggctggttg 310
                        |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ttctaggttacagatcattacagtagggaagtcaaggtaggaactgaaaacggctggttg 510

                                                                       
Query: 311 catcatagccacggccaggagcaggaaccaatacatacatgcttgcttatgcttaactta 370
           |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 511 catcatagccacggccaggagcaggaaccaatacatatgtgcttgcttatgcttaactta 570

                                                                       
Query: 371 aacttctctgctcttacacagctctggacccctgcctaaggaatggtaccacccacactg 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aacttctctgctcttacacagctctggacccctgcctaaggaatggtaccacccacactg 630

                                                                       
Query: 431 ggctggggtttcggcatcattcaatttatatgaccacacaggccaactcaacgtagacag 490
           |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 631 ggctggggtttcagcatcattcaatttatatgaccacacaggccaactcaacatagacag 690

                                                                       
Query: 491 tctctcactgagactcttcttaggtgatctaagggggtgagaagttgacaaagctagcta 550
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tctctcactgagactcttcttgggtgatctaagggggtgagaagttgacaaagctagcta 750

                                                                       
Query: 551 tcccagactccaggcctggccctgggatagggagtgggggtcctggtcctgcctatagcc 610
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tcccagactccaggcctggccctgggatagggagtgggggtcctggtcctgcctatagcc 810

                                                                       
Query: 611 cagctgagacctaggccaggcatgagagctcagatttcagtgacctgctgaagggccctg 670
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 cagctgagacctaggccaggcatgagagctcagatttcagtgacctgctgaagggccctg 870

                 
Query: 671 ggagga 676
           ||||||
Sbjct: 871 ggagga 876


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space:   709956
Effective search space used:   709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)