Query= MSMg01no514_i12.b1 MSMg01no514_i12.b1 CHROMAT_FILE:
MSMg01no514_i12.b1 PHD_FILE: MSMg01no514_i12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:28 2005
(622 letters)
>mm_chr5_140955613_140956634
Length = 1022
Score = 1036 bits (536), Expect = 0.0
Identities = 602/626 (96%), Gaps = 4/626 (0%)
Strand = Plus / Plus
Query: 1 agagaccaaaacttggtctgaaaacaggacagtccctaagtccccaagcacaaacaccag 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 agagaccaatacttggtctgaaaacaggacagtccctaagtccccaagcacaaacactag 260
Query: 61 cctgccaccagccagcttattgtggctggcaccctgcacccattcaatcccttcctcccc 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgccaccagccagcttactgtggctggcaccctgcacccattcaatcccttcctcccc 320
Query: 121 tccccttcccccacctcccaaaccctccatctcttctttaatcttcccttccttcccagg 180
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccctccccccacctccccaaccctccatctcttctttaatcttcccttccttcccagg 380
Query: 181 atgcattatttagctcagactgtcttcaaactctcctgttttagtctccttagggtccag 240
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 atgcattatttagctcaggctgtcttcaaactctcctgttttagtccccttagggtccag 440
Query: 241 tcctggactttttgtttgtttctttagttgttttgagacagagtctcactatgtagacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctggactttttgtttgtttctttagttgttttgagacagagtctcactatgtagacca 500
Query: 301 ggctgacctgggactcatgtaaaccaggctggctttttgttcgtctgtttgtttaaaata 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 ggctgacctgggactcatgtaaaccaggctggctttttgtttgtctgtttgtttaaaata 560
Query: 361 tttatttattttatgtgtgtgagtatactgtcactgtcttcagacacaccagaagagggc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 tttatttattttatgtgtgtgagtatactgtcactgtcttcagacacaccagaaaagggc 620
Query: 421 atcggatcccattacagacagttgtgagccaccatgtggttgctgggaattgaactcagg 480
||| |||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 atcagatcacattacagatggttgtgagccaccatgtggtttctgggaattgaactcagg 680
Query: 481 acctctagaagagcagtcagtgctcttaaccactgagccatctctccaggccccaggctg 540
|||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 681 acctctggaagagcagtcagtgctcttaaccactaaaacatctctccaggccccaggctg 740
Query: 541 gctttaaagacacagagaa----ctgcctgtgtcttttctcctgaatgctggcattaaag 596
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 741 gctttaaagacacagagaaagaactgcctgtgtcttttctcctgaatgctggcattaaag 800
Query: 597 gtttgcaccaccttgcacagccctgt 622
||||| |||||||||||||||||||
Sbjct: 801 gtttgtgccaccttgcacagccctgt 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_i12.g1 MSMg01no514_i12.g1 CHROMAT_FILE:
MSMg01no514_i12.g1 PHD_FILE: MSMg01no514_i12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:28 2005
(301 letters)
>mm_chr5_141091130_141091829
Length = 700
Score = 561 bits (290), Expect = e-164
Identities = 296/298 (99%), Gaps = 1/298 (0%)
Strand = Plus / Minus
Query: 1 ttaccaattgccttcttctctatgtcatgaccgggtctcccctgccctcatctgaaagtc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 497 ttaccaattgccttcttctctatgtcatgactgggtctcccctgccctcatctgaaagtc 438
Query: 61 ccctcgagttaccttgatggacaggtggcttagccccaactcccaagcaagactagggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ccctcgagttaccttgatggacaggtggcttagccccaactcccaagcaagactagggcc 378
Query: 121 ccttgggttgctgcaaagagcacctttattcagaggaaggacgtcaccatagcaacaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ccttgggttgctgcaaagagcacctttattcagaggaaggacgtcaccatagcaacaaca 318
Query: 181 catcaattccctgagagcttttcccttatcatcattagcttgcctagttaaggtctttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 catcaattccctgagagcttttcccttatcatcattagcttgcctagttaaggtctttgc 258
Query: 241 aaaaagaacacagaatacagcccaggggtaggggagtgagagagttgggggtggtggg 298
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 257 aaaaagaacacagaatacagcccaggggtaggggagtgag-gagttgggggtggtggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 700
Length adjustment: 9
Effective length of query: 292
Effective length of database: 691
Effective search space: 201772
Effective search space used: 201772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
