Query= MSMg01no514_i23.b1 MSMg01no514_i23.b1 CHROMAT_FILE:
MSMg01no514_i23.b1 PHD_FILE: MSMg01no514_i23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:30 2005
(632 letters)
>mm_chr5_7338186_7339217
Length = 1032
Score = 1191 bits (616), Expect = 0.0
Identities = 625/628 (99%)
Strand = Plus / Plus
Query: 5 gaattcatgattgtcttcgccccaaacttgcagccttgccaagaaggaagaaagttaaaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgattgtcaaagccccaaacttgcagccttgccaagaaggaagaaagttaaaa 264
Query: 65 ctcaaaactgtgtagcatagagtccccagtgtcagcctcatatagggacagcctatgttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcaaaactgtgtagcatagagtccccagtgtcagcctcatatagggacagcctatgttt 324
Query: 125 cattatttataacttgttttgacaataaatctaagtctcttgaaggaaatttcatgcatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cattatttataacttgttttgacaataaatctaagtctcttgaaggaaatttcatgcatt 384
Query: 185 aaaataacaaaacataaattttaaaagaataagcaccccaggaaataaaataagacttag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaataacaaaacataaattttaaaagaataagcaccccaggaaataaaataagacttag 444
Query: 245 actggaaatgagttacaagcacaggtgaatcgtggggttagaagacaacctttgattcct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actggaaatgagttacaagcacaggtgaatcgtggggttagaagacaacctttgattcct 504
Query: 305 ctcattttatctctgggctttctatcagccaaaggaacatagaaacagaactgtgtttac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctcattttatctctgggctttctatcagccaaaggaacatagaaacagaactgtgtttac 564
Query: 365 tatataggcatctctcttcttgtggaaaaaattaaataaatatttcctttcttagtattt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatataggcatctctcttcttgtggaaaaaattaaataaatatttcctttcttagtattt 624
Query: 425 agatttaagatgacatatttaaacaaaagaaaactcagctcaacacatcaggtgtccatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agatttaagatgacatatttaaacaaaagaaaactcagctcaacacatcaggtgtccatc 684
Query: 485 tctgcaaaactgaaatcattagcaaaaacaaattttaaaattccttcttcattttaaaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tctgcaaaactgaaatcattagcaaaaacaaattttaaaattccttcttcattttaaaaa 744
Query: 545 cttgatttgtacttttatattattacagttcaggatactatctaaattaagaagtaactt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cttgatttgtacttttatattattacagttcaggatactatctaaattaagaagtaactt 804
Query: 605 atctcttctgagtttcaacttcaggtag 632
||||||||||||||||||||||||||||
Sbjct: 805 atctcttctgagtttcaacttcaggtag 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_i23.g1 MSMg01no514_i23.g1 CHROMAT_FILE:
MSMg01no514_i23.g1 PHD_FILE: MSMg01no514_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:30 2005
(600 letters)
>mm_chr5_7490243_7491245
Length = 1003
Score = 756 bits (391), Expect = 0.0
Identities = 406/413 (98%), Gaps = 6/413 (1%)
Strand = Plus / Minus
Query: 1 cattaatgaggaatgggatagtggaatgggaactttctctgtcctttctggtctcccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cattaatgaggaatgggatagtggaatgggaactttctctgtcctttctggtctcccaaa 354
Query: 61 cccagcaaaccttgaattttttaaaatctgaagtctaataatgaaaatattctccaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cccagcaaaccttgaattttttaaaatctgaagtctaataatgaaaatattctccaacat 294
Query: 121 ttattagttgtgtgtgctaggatgctgttattctctttggtttcagttttcttacactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttattagttgtgtgtgctaggatgctgttattctctttggtttcagttttcttacactta 234
Query: 181 c---actttgagatattagagaaaaacactggttttctttttaaa--tttttttttatgg 235
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 233 cctttctttgagatattagagaaaaacactggttttctttttaaatttttttttttatgg 174
Query: 236 atgccaacctgcttgtatgtgcatatgcatgctgccacatgtatgccttgtgccctggaa 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atgccaacctgcttgtatgtgcatatgcatgctgccacatgtatgccttgtgccctggaa 114
Query: 296 gcgagaagacatcaccttcccttgactggaatcgcagactattgtgaagtgacatgctgg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gcgagaagacatcaccttcccttgactggaatcgcagactattgtgaagtgacatgctgg 54
Query: 356 tactgggaat-aaagcctggttccctggaagaacaatcactccagtcccaaac 407
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tactgggaataaaagcctggttccctggaagaacaatcactccagtcccaaac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1003
Length adjustment: 10
Effective length of query: 590
Effective length of database: 993
Effective search space: 585870
Effective search space used: 585870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
